RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 IMPA2O14732 288 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 DHHO43323 396 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 SLC2A10O95528 541 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 WNT11O96014 354 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 IGHMP01871 453 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 CBR1P16152 277 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 IFNA8P32881 189 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 MAGEA2P43356 314 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 IDH3GP51553 393 aaPredicted RBP11.53□□□□□ -0.56
LINC00399-201ENST00000439008 ZNF133P52736 654 aaPredicted RBP11.53□□□□□ -0.56
LINC00399-201ENST00000439008 UBE2NP61088 152 aaKnown RBP11.53□□□□□ -0.56
LINC00399-201ENST00000439008 ERVK-25P63136 954 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 NAAAQ02083 359 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 HGFACQ04756 655 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 PIGFQ07326 219 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 DBPQ10586 325 aaPredicted RBP11.53□□□□□ -0.56
LINC00399-201ENST00000439008 PPP1R8Q12972 351 aaKnown RBP11.53□□□□□ -0.56
LINC00399-201ENST00000439008 PGM2L1Q6PCE3 622 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 KLHL17Q6TDP4 642 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 PIWIL3Q7Z3Z3 882 aaKnown RBP11.53□□□□□ -0.56
LINC00399-201ENST00000439008 ZER1Q7Z7L7 766 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 DTX2Q86UW9 622 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 PIGTQ969N2 578 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 CCDC124Q96CT7 223 aaKnown RBP11.53□□□□□ -0.56
LINC00399-201ENST00000439008 PERPQ96FX8 193 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 SH3GL3Q99963 347 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 THTPAQ9BU02 230 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 TRAF4Q9BUZ4 470 aaPredicted RBP11.53□□□□□ -0.56
LINC00399-201ENST00000439008 ZNF701Q9NV72 531 aaPredicted RBP11.53□□□□□ -0.56
LINC00399-201ENST00000439008 TMEM38BQ9NVV0 291 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 IL20RAQ9UHF4 553 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 PRPF19Q9UMS4 504 aaKnown RBP11.53□□□□□ -0.56
LINC00399-201ENST00000439008 POFUT2Q9Y2G5 429 aa11.53□□□□□ -0.56
LINC00399-201ENST00000439008 FAM32AQ9Y421 112 aaKnown RBP11.53□□□□□ -0.56
LINC00399-201ENST00000439008 HTR3EA5X5Y0 456 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 NPIPB13A6NJU9 1138 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 NPIPB4C9JG80 1138 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 H7C1C5 153 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 SMPD2O60906 423 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 GADD45GO95257 159 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 IGHG1P01857 330 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 FABP3P05413 133 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 HOXB1P14653 301 aaPredicted RBP11.52□□□□□ -0.57
LINC00399-201ENST00000439008 RRM2P31350 389 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 CDAP32320 146 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 CDKN1AP38936 164 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 PTH2RP49190 550 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 DAP3P51398 398 aaKnown RBP11.52□□□□□ -0.57
LINC00399-201ENST00000439008 CLRN1P58418 232 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 RPL27P61353 136 aaKnown RBP11.52□□□□□ -0.57
LINC00399-201ENST00000439008 LCN6P62502 163 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 NKX6-1P78426 367 aaPredicted RBP11.52□□□□□ -0.57
LINC00399-201ENST00000439008 SPIBQ01892 262 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 ZBED5Q49AG3 693 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 C11orf71Q6IPW1 123 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 FAM122BQ7Z309 247 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 DHFR2Q86XF0 187 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 TGIF2LYQ8IUE0 185 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 ZNF584Q8IVC4 421 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 ARHGAP24Q8N264 748 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 SLC22A24Q8N4F4 322 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 FAM169BQ8N8A8 192 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 GTPBP3Q969Y2 492 aaKnown RBP11.52□□□□□ -0.57
LINC00399-201ENST00000439008 Q96M85 177 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 KATNB1Q9BVA0 655 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 TMUB1Q9BVT8 246 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 B3GAT2Q9NPZ5 323 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 DLL4Q9NR61 685 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 EDARQ9UNE0 448 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 MGAT4BQ9UQ53 548 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 TLN2Q9Y4G6 2542 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 NF1P21359 2839 aa11.52□□□□□ -0.57
LINC00399-201ENST00000439008 IGHV2OR16-5A0A0B4J2B6 119 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 SCG5P05408 212 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 PAX1P15863 534 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 ZNF14P17017 642 aaPredicted RBP11.51□□□□□ -0.57
LINC00399-201ENST00000439008 TTKP33981 857 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 ACVR1BP36896 505 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 GIPRP48546 466 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 SLC9A3P48764 834 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 NPRL3Q12980 569 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 MSMPQ1L6U9 139 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 MST1LQ2TV78 715 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 C3orf36Q3SXR2 165 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 MESTQ5EB52 335 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 Q5PR19 223 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 C10orf128Q5T292 105 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 C1QTNF12Q5T7M4 302 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 SLC25A47Q6Q0C1 308 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 LRRC75A-AS1Q8N1F1 130 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 OR4C15Q8NGM1 316 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 TMEM171Q8WVE6 324 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 NABP1Q96AH0 204 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 RASD2Q96D21 266 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 RSRC1Q96IZ7 334 aaKnown RBP11.51□□□□□ -0.57
LINC00399-201ENST00000439008 RADILQ96JH8 1075 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 DHRS9Q9BPW9 319 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 GSX2Q9BZM3 304 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 LYVE1Q9Y5Y7 322 aa11.51□□□□□ -0.57
LINC00399-201ENST00000439008 ATP23Q9Y6H3 246 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms