RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 LEF1Q9UJU2 399 aaPredicted RBP12.22□□□□□ -0.45
SMARCE1-205ENST00000431889 NDUFAF1Q9Y375 327 aa12.22□□□□□ -0.45
SMARCE1-205ENST00000431889 SPEF1Q9Y4P9 236 aa12.22□□□□□ -0.45
SMARCE1-205ENST00000431889 CACNG2Q9Y698 323 aa12.22□□□□□ -0.45
SMARCE1-205ENST00000431889 TCF21O43680 179 aa12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 UBL3O95164 117 aa12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 CCNOP22674 350 aa12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 CDAP32320 146 aa12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 CRYBA2P53672 197 aa12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 CCL8P80075 99 aa12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 NKPD1Q17RQ9 610 aa12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 ZNF613Q6PF04 617 aa12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 MEX3DQ86XN8 651 aaKnown RBP12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 NKAIN4Q8IVV8 208 aa12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 CCDC36Q8IYA8 594 aa12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 SLC30A7Q8NEW0 376 aa12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 SLC26A7Q8TE54 656 aa12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 ZNF566Q969W8 418 aa12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 ATP6V1G3Q96LB4 118 aa12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 MEPEQ9NQ76 525 aaPredicted RBP12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 TMEM38BQ9NVV0 291 aa12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 HIF1ANQ9NWT6 349 aa12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 CORO2BQ9UQ03 480 aa12.21□□□□□ -0.46
SMARCE1-205ENST00000431889 NBEAL1Q6ZS30 2694 aa12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 ANGPT2O15123 496 aa12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 VENTXO95231 258 aa12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 MT-ATP6P00846 226 aa12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 LCKP06239 509 aa12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 PGA4P0DJD7 388 aa12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 PGA3P0DJD8 388 aa12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 SAGP10523 405 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 ATP4BP51164 291 aa12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 CLRN1P58418 232 aa12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 RBBP4Q09028 425 aa12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 SPATA46Q5T0L3 261 aa12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 RGS7BPQ6MZT1 257 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 DEF8Q6ZN54 512 aa12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 ZNF627Q7L945 461 aa12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 OR6X1Q8NH79 312 aa12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 TMEM255BQ8WV15 326 aa12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 PRSS27Q9BQR3 290 aa12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 SH3GLB1Q9Y371 365 aa12.2□□□□□ -0.46
SMARCE1-205ENST00000431889 TRAPPC13A5PLN9 417 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 DHHO43323 396 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 PIP5K1CO60331 668 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 SLC2A10O95528 541 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 HIST1H2ABP04908 130 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 SERPINA5P05154 406 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 OR8G3PP0DMU2 310 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 FUT4P22083 530 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 AQP2P41181 271 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 OR1E2P47887 323 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 UGT2B15P54855 530 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 TSTQ16762 297 aaKnown RBP12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 RABL3Q5HYI8 236 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 LIPNQ5VXI9 398 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 FAHD2BQ6P2I3 314 aaPredicted RBP12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 HIST3H2AQ7L7L0 130 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 PIWIL3Q7Z3Z3 882 aaKnown RBP12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 NANOGNBQ7Z5D8 188 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 CLDN22Q8N7P3 220 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 MOSPD2Q8NHP6 518 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 NSMAFQ92636 917 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 RDH5Q92781 318 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 HPS1Q92902 700 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 HIST1H2ACQ93077 130 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 MCHR2Q969V1 340 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 FAHD2AQ96GK7 314 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 SLC25A44Q96H78 314 aaPredicted RBP12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 LRRC37BQ96QE4 947 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 MS4A5Q9H3V2 200 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 ZNF385DQ9H6B1 395 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 KAT8Q9H7Z6 458 aaKnown RBP12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 C20orf141Q9NUB4 165 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 INTS9Q9NV88 658 aaKnown RBP12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 SLC7A8Q9UHI5 535 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 ARHGAP32A7KAX9 2087 aa12.19□□□□□ -0.46
SMARCE1-205ENST00000431889 IGKV1D-43A0A0B4J1Z2 117 aa12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 A0A0G2JND7 137 aa12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 FBP2O00757 339 aa12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 TPD52L2O43399 206 aaKnown RBP12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 BCL10O95999 233 aa12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 THBS2P35442 1172 aa12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 FMODQ06828 376 aa12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 RPL18Q07020 188 aaKnown RBP12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 TMEM255AQ5JRV8 349 aa12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 SWT1Q5T5J6 900 aaKnown RBP12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 SLC16A14Q7RTX9 510 aa12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 BHLHE22Q8NFJ8 381 aaPredicted RBP12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 CDH20Q9HBT6 801 aa12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 GMEB1Q9Y692 573 aa12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 B4DSR2 109 aa12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 MCIDASD6RGH6 385 aa12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 TRMUO75648 421 aaKnown RBP12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 AVPP01185 164 aa12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 C8BP07358 591 aa12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 ASAH2BP0C7U1 165 aa12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 GAAP10253 952 aa12.18□□□□□ -0.46
SMARCE1-205ENST00000431889 LSP1P33241 339 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms