RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 LCN6P62502 163 aa16.23■□□□□ 0.19
HMGN1-206ENST00000431390 SRYQ05066 204 aa16.23■□□□□ 0.19
HMGN1-206ENST00000431390 RUNX1T1Q06455 604 aa16.23■□□□□ 0.19
HMGN1-206ENST00000431390 PLEKHN1Q494U1 663 aaPredicted RBP16.23■□□□□ 0.19
HMGN1-206ENST00000431390 EEF1A1P5Q5VTE0 462 aa16.23■□□□□ 0.19
HMGN1-206ENST00000431390 XAF1Q6GPH4 301 aa16.23■□□□□ 0.19
HMGN1-206ENST00000431390 CREB3L2Q70SY1 520 aa16.23■□□□□ 0.19
HMGN1-206ENST00000431390 ZBTB46Q86UZ6 589 aa16.23■□□□□ 0.19
HMGN1-206ENST00000431390 SLC25A44Q96H78 314 aaPredicted RBP16.23■□□□□ 0.19
HMGN1-206ENST00000431390 WDYHV1Q96HA8 205 aa16.23■□□□□ 0.19
HMGN1-206ENST00000431390 ZNF845Q96IR2 970 aaPredicted RBP16.23■□□□□ 0.19
HMGN1-206ENST00000431390 JAM3Q9BX67 310 aa16.23■□□□□ 0.19
HMGN1-206ENST00000431390 ACOT13Q9NPJ3 140 aa16.23■□□□□ 0.19
HMGN1-206ENST00000431390 J3QRE1 110 aa16.22■□□□□ 0.19
HMGN1-206ENST00000431390 IGHG1P01857 330 aa16.22■□□□□ 0.19
HMGN1-206ENST00000431390 CRYABP02511 175 aaKnown RBP16.22■□□□□ 0.19
HMGN1-206ENST00000431390 CRABP1P29762 137 aa16.22■□□□□ 0.19
HMGN1-206ENST00000431390 ATP6V1E1P36543 226 aa16.22■□□□□ 0.19
HMGN1-206ENST00000431390 CENPAP49450 140 aa16.22■□□□□ 0.19
HMGN1-206ENST00000431390 LINC01590Q5TEZ4 76 aa16.22■□□□□ 0.19
HMGN1-206ENST00000431390 FCRLAQ7L513 359 aa16.22■□□□□ 0.19
HMGN1-206ENST00000431390 OR6V1Q8N148 313 aa16.22■□□□□ 0.19
HMGN1-206ENST00000431390 POMGNT2Q8NAT1 580 aa16.22■□□□□ 0.19
HMGN1-206ENST00000431390 OR51G2Q8NGK0 314 aa16.22■□□□□ 0.19
HMGN1-206ENST00000431390 FNDC8Q8TC99 324 aa16.22■□□□□ 0.19
HMGN1-206ENST00000431390 FCGR1BQ92637 280 aa16.22■□□□□ 0.19
HMGN1-206ENST00000431390 PNPLA2Q96AD5 504 aa16.22■□□□□ 0.19
HMGN1-206ENST00000431390 MRPL13Q9BYD1 178 aaKnown RBP16.22■□□□□ 0.19
HMGN1-206ENST00000431390 NUAK2Q9H093 628 aa16.22■□□□□ 0.19
HMGN1-206ENST00000431390 TNFRSF10DQ9UBN6 386 aa16.22■□□□□ 0.19
HMGN1-206ENST00000431390 MCTS1Q9ULC4 181 aaKnown RBP16.22■□□□□ 0.19
HMGN1-206ENST00000431390 EXOSC1Q9Y3B2 195 aaKnown RBP16.22■□□□□ 0.19
HMGN1-206ENST00000431390 SLC35F4A4IF30 521 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 ZNF726A6NNF4 738 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 ZNF716A6NP11 495 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 AKAP8O43823 692 aaKnown RBP16.21■□□□□ 0.19
HMGN1-206ENST00000431390 SYNGR4O95473 234 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 IGHA1P01876 353 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 ADRA2AP08913 450 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 SBK2P0C263 348 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 MAP2K4P45985 399 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 CLDN17P56750 224 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 NEDD8Q15843 81 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 DNM1P34Q6PK57 102 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 B3GLCTQ6Y288 498 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 CHMP1BQ7LBR1 199 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 NOXO1Q8NFA2 376 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 PROKR2Q8NFJ6 384 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 OR4F15Q8NGB8 312 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 FAR1Q8WVX9 515 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 ROBO4Q8WZ75 1007 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 ZMYND19Q96E35 227 aaPredicted RBP16.21■□□□□ 0.19
HMGN1-206ENST00000431390 TSSK2Q96PF2 358 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 TUBA1CQ9BQE3 449 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 EMC6Q9BV81 110 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 PRDM14Q9GZV8 571 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 RACGAP1Q9H0H5 632 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 ADGRL4Q9HBW9 690 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 SRA1Q9HD15 236 aaKnown RBP16.21■□□□□ 0.19
HMGN1-206ENST00000431390 B9D1Q9UPM9 204 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 LRRK2Q5S007 2527 aa16.21■□□□□ 0.19
HMGN1-206ENST00000431390 DCTN6O00399 190 aa16.21■□□□□ 0.18
HMGN1-206ENST00000431390 PGA4P0DJD7 388 aa16.21■□□□□ 0.18
HMGN1-206ENST00000431390 PGA3P0DJD8 388 aa16.21■□□□□ 0.18
HMGN1-206ENST00000431390 MYL12AP19105 171 aa16.21■□□□□ 0.18
HMGN1-206ENST00000431390 PYCR1P32322 319 aa16.21■□□□□ 0.18
HMGN1-206ENST00000431390 BLVRAP53004 296 aa16.21■□□□□ 0.18
HMGN1-206ENST00000431390 NADK2Q4G0N4 442 aa16.21■□□□□ 0.18
HMGN1-206ENST00000431390 UBE2UQ5VVX9 321 aa16.21■□□□□ 0.18
HMGN1-206ENST00000431390 WDFY1Q8IWB7 410 aa16.21■□□□□ 0.18
HMGN1-206ENST00000431390 OR51L1Q8NGJ5 315 aa16.21■□□□□ 0.18
HMGN1-206ENST00000431390 OR6K6Q8NGW6 343 aa16.21■□□□□ 0.18
HMGN1-206ENST00000431390 RNF128Q8TEB7 428 aa16.21■□□□□ 0.18
HMGN1-206ENST00000431390 ZNRF4Q8WWF5 429 aa16.21■□□□□ 0.18
HMGN1-206ENST00000431390 MUL1Q969V5 352 aa16.21■□□□□ 0.18
HMGN1-206ENST00000431390 SARAFQ96BY9 339 aa16.21■□□□□ 0.18
HMGN1-206ENST00000431390 INPP5EQ9NRR6 644 aa16.21■□□□□ 0.18
HMGN1-206ENST00000431390 CHCHD3Q9NX63 227 aaKnown RBP16.21■□□□□ 0.18
HMGN1-206ENST00000431390 FLVCR1Q9Y5Y0 555 aa16.21■□□□□ 0.18
HMGN1-206ENST00000431390 IGKV3D-15A0A087WSY6 115 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 IGLV1-36A0A0B4J1U3 117 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 DPPA5A6NC42 116 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 A6NHS1 94 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 APOL3O95236 402 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 NR2C1P13056 603 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 CLRN1P58418 232 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 ACTC1P68032 377 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 ACTA1P68133 377 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 RASGEF1BQ0VAM2 473 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 DBPQ10586 325 aaPredicted RBP16.2■□□□□ 0.18
HMGN1-206ENST00000431390 THEM4Q5T1C6 240 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 SHFQ7M4L6 423 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 ZIC4Q8N9L1 334 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 SYT14Q8NB59 555 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 RORBQ92753 470 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 ZNF385AQ96PM9 386 aaKnown RBP16.2■□□□□ 0.18
HMGN1-206ENST00000431390 RBP7Q96R05 134 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 CNN2Q99439 309 aaKnown RBP16.2■□□□□ 0.18
HMGN1-206ENST00000431390 CAMK2AQ9UQM7 478 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 RCE1Q9Y256 329 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms