RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 C9orf62Q8N4C0 152 aa7.36□□□□□ -1.23
HPS4-205ENST00000429411 GALNT11Q8NCW6 608 aa7.36□□□□□ -1.23
HPS4-205ENST00000429411 MCCC2Q9HCC0 563 aa7.36□□□□□ -1.23
HPS4-205ENST00000429411 MRPS18AQ9NVS2 196 aaKnown RBP7.36□□□□□ -1.23
HPS4-205ENST00000429411 ABRACLQ9P1F3 81 aa7.36□□□□□ -1.23
HPS4-205ENST00000429411 ASH2LQ9UBL3 628 aa7.36□□□□□ -1.23
HPS4-205ENST00000429411 ZNF281Q9Y2X9 895 aa7.36□□□□□ -1.23
HPS4-205ENST00000429411 CACNA1AO00555 2505 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 C17orf51A8MQB3 221 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 GALR3O60755 368 aaPredicted RBP7.35□□□□□ -1.23
HPS4-205ENST00000429411 TRIM3O75382 744 aaPredicted RBP7.35□□□□□ -1.23
HPS4-205ENST00000429411 SEMA4FO95754 770 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 RAF1P04049 648 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 NUDT1P36639 197 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 NR0B1P51843 470 aaKnown RBP7.35□□□□□ -1.23
HPS4-205ENST00000429411 LTBQ06643 244 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 BTN1A1Q13410 526 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 HTR4Q13639 388 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 HABP2Q14520 560 aaPredicted RBP7.35□□□□□ -1.23
HPS4-205ENST00000429411 ZBTB37Q5TC79 503 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 RNLSQ5VYX0 342 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 OR10K2Q6IF99 312 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 CBLN3Q6UW01 205 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 TEX261Q6UWH6 196 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 NHLRC1Q6VVB1 395 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 HDDC2Q7Z4H3 204 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 CA13Q8N1Q1 262 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 C16orf52Q8NHV5 167 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 ZNRF4Q8WWF5 429 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 ZNF436Q9C0F3 470 aaPredicted RBP7.35□□□□□ -1.23
HPS4-205ENST00000429411 HRASLSQ9HDD0 168 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 FBXL2Q9UKC9 423 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 PLEKHA6Q9Y2H5 1048 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 U3KQ87 197 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 SPTAN1Q13813 2472 aaKnown RBP7.35□□□□□ -1.23
HPS4-205ENST00000429411 TMEM150CB9EJG8 249 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 APOC3P02656 99 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 TPMTP51580 245 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 CCR9P51686 369 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 PER3P56645 1201 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 FOXL2P58012 376 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 OPCMLQ14982 345 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 LINC00303Q3SY05 128 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 PM20D2Q8IYS1 436 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 OR10AC1Q8NH08 325 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 DUSP19Q8WTR2 217 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 MRGPRX1Q96LB2 322 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 BMFQ96LC9 184 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 SFXN2Q96NB2 322 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 G6PC3Q9BUM1 346 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 OR10A5Q9H207 317 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 SMOC1Q9H4F8 434 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 FBRSQ9HAH7 460 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 CAMK2AQ9UQM7 478 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 NOP16Q9Y3C1 178 aaKnown RBP7.35□□□□□ -1.23
HPS4-205ENST00000429411 NPFFR2Q9Y5X5 522 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 A0A0B4J2E0 115 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 A0A1B0GX12 115 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 SERINC4A6NH21 518 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 IFITM5A6NNB3 132 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 M0QYG6 137 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 LGALS8O00214 317 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 PRICKLE3O43900 615 aaPredicted RBP7.35□□□□□ -1.23
HPS4-205ENST00000429411 SLC16A7O60669 478 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 CBX7O95931 251 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 AK1P00568 194 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 SRFP11831 508 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 TSFMP43897 325 aaKnown RBP7.35□□□□□ -1.23
HPS4-205ENST00000429411 GMFBP60983 142 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 BTG1P62324 171 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 ZXDAP98168 799 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 PSG6Q00889 435 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 SPOCK1Q08629 439 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 MELKQ14680 651 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 TAF13Q15543 124 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 PRICKLE4Q2TBC4 344 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 PLA1AQ53H76 456 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 UBE2NLQ5JXB2 153 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 NKAIN2Q5VXU1 208 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 TIGD3Q6B0B8 471 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 LAMTOR1Q6IAA8 161 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 TMPRSS11FQ6ZWK6 438 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 KCTD9Q7L273 389 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 CD163Q86VB7 1156 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 PPP1R14AQ96A00 147 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 SEC22AQ96IW7 307 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 ELL3Q9HB65 397 aaPredicted RBP7.35□□□□□ -1.23
HPS4-205ENST00000429411 INPP5EQ9NRR6 644 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 COMMD9Q9P000 198 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 COPZ2Q9P299 210 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 CKLFQ9UBR5 152 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 PCOLCE2Q9UKZ9 415 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 SLC22A13Q9Y226 551 aa7.35□□□□□ -1.23
HPS4-205ENST00000429411 PLRG1O43660 514 aaKnown RBP7.34□□□□□ -1.23
HPS4-205ENST00000429411 SSX5O60225 188 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 PRAMEF2O60811 474 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 PPM1BO75688 479 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 ZNF35P13682 527 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 TACR3P29371 465 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 POU3F4P49335 361 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms