RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 TMEM249Q2WGJ8 235 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 SPATA21Q7Z572 469 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 VTCN1Q7Z7D3 282 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 ZNF584Q8IVC4 421 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 SVOPLQ8N434 492 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 MOSPD2Q8NHP6 518 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 ASB10Q8WXI3 467 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 LZICQ8WZA0 190 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 MCHR2Q969V1 340 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 ZNF347Q96SE7 839 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 INIPQ9NRY2 104 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 CXCR6O00574 342 aa18.58■□□□□ 0.57
CDCP1-202ENST00000425231 RAB36O95755 333 aa18.58■□□□□ 0.57
CDCP1-202ENST00000425231 PDLIM4P50479 330 aa18.58■□□□□ 0.57
CDCP1-202ENST00000425231 CLRN1P58418 232 aa18.58■□□□□ 0.57
CDCP1-202ENST00000425231 RAB39AQ14964 217 aa18.58■□□□□ 0.57
CDCP1-202ENST00000425231 MSMPQ1L6U9 139 aa18.58■□□□□ 0.57
CDCP1-202ENST00000425231 ARMC4Q5T2S8 1044 aa18.58■□□□□ 0.57
CDCP1-202ENST00000425231 HACD2Q6Y1H2 254 aa18.58■□□□□ 0.57
CDCP1-202ENST00000425231 SH3GL3Q99963 347 aa18.58■□□□□ 0.57
CDCP1-202ENST00000425231 YAE1D1Q9NRH1 226 aa18.58■□□□□ 0.57
CDCP1-202ENST00000425231 MAN2C1Q9NTJ4 1040 aa18.58■□□□□ 0.57
CDCP1-202ENST00000425231 FBXO9Q9UK97 447 aaPredicted RBP18.58■□□□□ 0.57
CDCP1-202ENST00000425231 CENPBD1B2RD01 187 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 J3KTA2 159 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 FFAR1O14842 300 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 TRMUO75648 421 aaKnown RBP18.57■□□□□ 0.56
CDCP1-202ENST00000425231 SERPINA5P05154 406 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 ACADSP16219 412 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 YAP1P46937 504 aaKnown RBP18.57■□□□□ 0.56
CDCP1-202ENST00000425231 GSK3BP49841 420 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 ZNF133P52736 654 aaPredicted RBP18.57■□□□□ 0.56
CDCP1-202ENST00000425231 SEC24CP53992 1094 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 VLDLRP98155 873 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 MYBPC1Q00872 1141 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 CBLL1Q75N03 491 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 ZCCHC24Q8N2G6 241 aaKnown RBP18.57■□□□□ 0.56
CDCP1-202ENST00000425231 NOXO1Q8NFA2 376 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 ELAC2Q9BQ52 826 aaKnown RBP18.57■□□□□ 0.56
CDCP1-202ENST00000425231 MYLK2Q9H1R3 596 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 HIF3AQ9Y2N7 669 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 CMAHPQ9Y471 501 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 HTR3EA5X5Y0 456 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 NPIPB13A6NJU9 1138 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 KIAA1324LA8MWY0 1029 aaPredicted RBP18.57■□□□□ 0.56
CDCP1-202ENST00000425231 NPIPB4C9JG80 1138 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 MCIDASD6RGH6 385 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 NDUFS8O00217 210 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 USF1P22415 310 aaPredicted RBP18.57■□□□□ 0.56
CDCP1-202ENST00000425231 DAP3P51398 398 aaKnown RBP18.57■□□□□ 0.56
CDCP1-202ENST00000425231 FXNQ16595 210 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 NRN1LQ496H8 165 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 CDK20Q8IZL9 346 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 OFCC1Q8IZS5 231 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 SYT14Q8NB59 555 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 OR4K5Q8NGD3 323 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 BPIFA2Q96DR5 249 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 FOXN4Q96NZ1 517 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 RAB1BQ9H0U4 201 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 MYOZ1Q9NP98 299 aaPredicted RBP18.57■□□□□ 0.56
CDCP1-202ENST00000425231 RHCGQ9UBD6 479 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 FBXL3Q9UKT7 428 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 SPEF1Q9Y4P9 236 aa18.57■□□□□ 0.56
CDCP1-202ENST00000425231 LOC390937A0A1W2PQ73 354 aa18.56■□□□□ 0.56
CDCP1-202ENST00000425231 SH3PXD2BA1X283 911 aa18.56■□□□□ 0.56
CDCP1-202ENST00000425231 ENTPD5O75356 428 aa18.56■□□□□ 0.56
CDCP1-202ENST00000425231 FARS2O95363 451 aaKnown RBP18.56■□□□□ 0.56
CDCP1-202ENST00000425231 ZNF682O95780 498 aa18.56■□□□□ 0.56
CDCP1-202ENST00000425231 IFNW1P05000 195 aa18.56■□□□□ 0.56
CDCP1-202ENST00000425231 IFI30P13284 250 aa18.56■□□□□ 0.56
CDCP1-202ENST00000425231 IFNA8P32881 189 aa18.56■□□□□ 0.56
CDCP1-202ENST00000425231 GLRXP35754 106 aa18.56■□□□□ 0.56
CDCP1-202ENST00000425231 NR4A2P43354 598 aa18.56■□□□□ 0.56
CDCP1-202ENST00000425231 NUDT2P50583 147 aa18.56■□□□□ 0.56
CDCP1-202ENST00000425231 C6orf52Q5T4I8 152 aa18.56■□□□□ 0.56
CDCP1-202ENST00000425231 MRPL24Q96A35 216 aaKnown RBP18.56■□□□□ 0.56
CDCP1-202ENST00000425231 NMD3Q96D46 503 aaKnown RBP18.56■□□□□ 0.56
CDCP1-202ENST00000425231 MRPL37Q9BZE1 423 aaKnown RBP18.56■□□□□ 0.56
CDCP1-202ENST00000425231 ABCD2Q9UBJ2 740 aa18.56■□□□□ 0.56
CDCP1-202ENST00000425231 A8MV72 311 aaPredicted RBP18.55■□□□□ 0.56
CDCP1-202ENST00000425231 PRSS23O95084 383 aa18.55■□□□□ 0.56
CDCP1-202ENST00000425231 MAKP20794 623 aa18.55■□□□□ 0.56
CDCP1-202ENST00000425231 EVX1P49640 407 aa18.55■□□□□ 0.56
CDCP1-202ENST00000425231 FHL1Q13642 323 aa18.55■□□□□ 0.56
CDCP1-202ENST00000425231 C10orf128Q5T292 105 aa18.55■□□□□ 0.56
CDCP1-202ENST00000425231 HDDC2Q7Z4H3 204 aa18.55■□□□□ 0.56
CDCP1-202ENST00000425231 HIPK1Q86Z02 1210 aa18.55■□□□□ 0.56
CDCP1-202ENST00000425231 GEMIN6Q8WXD5 167 aaKnown RBP18.55■□□□□ 0.56
CDCP1-202ENST00000425231 HDAC2Q92769 488 aaKnown RBP18.55■□□□□ 0.56
CDCP1-202ENST00000425231 FNDC11Q9BVV2 318 aa18.55■□□□□ 0.56
CDCP1-202ENST00000425231 TXNIPQ9H3M7 391 aa18.55■□□□□ 0.56
CDCP1-202ENST00000425231 GSTA4O15217 222 aa18.54■□□□□ 0.56
CDCP1-202ENST00000425231 SERPINA1P01009 418 aa18.54■□□□□ 0.56
CDCP1-202ENST00000425231 ZNF84P51523 738 aa18.54■□□□□ 0.56
CDCP1-202ENST00000425231 PRKCDQ05655 676 aa18.54■□□□□ 0.56
CDCP1-202ENST00000425231 TRAM2Q15035 370 aa18.54■□□□□ 0.56
CDCP1-202ENST00000425231 IFI44LQ53G44 452 aa18.54■□□□□ 0.56
CDCP1-202ENST00000425231 ALG10Q5BKT4 473 aa18.54■□□□□ 0.56
CDCP1-202ENST00000425231 TSEN54Q7Z6J9 526 aaKnown RBP18.54■□□□□ 0.56
CDCP1-202ENST00000425231 DPPA2Q7Z7J5 298 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms