RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 SBK2P0C263 348 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 GSTT1P30711 240 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 CAPZA2P47755 286 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 NUDT6P53370 316 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 RUNX1T1Q06455 604 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 TEX30Q5JUR7 227 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 FAM180AQ6UWF9 173 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 AHSA2Q719I0 299 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 CHMP1BQ7LBR1 199 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 GPAT4Q86UL3 456 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 UBQLNLQ8IYU4 475 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 STX19Q8N4C7 294 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 NOXO1Q8NFA2 376 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 PROKR2Q8NFJ6 384 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 OR52I1Q8NGK6 324 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 FAR1Q8WVX9 515 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 TMEM54Q969K7 222 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 RNFT2Q96EX2 444 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 DNAJA3Q96EY1 480 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 TXNDC15Q96J42 360 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 RBP7Q96R05 134 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 OR2M2Q96R28 347 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 MYCBPQ99417 103 aaPredicted RBP12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 NUAK2Q9H093 628 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 SYT4Q9H2B2 425 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 EXO5Q9H790 373 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 CALHM2Q9HA72 323 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 ADGRL4Q9HBW9 690 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 AMBNQ9NP70 447 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 MED29Q9NX70 200 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 EMC3Q9P0I2 261 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 CLCF1Q9UBD9 225 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 FOXD3Q9UJU5 478 aaPredicted RBP12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 B9D1Q9UPM9 204 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 EXOSC1Q9Y3B2 195 aaKnown RBP12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 SNX5Q9Y5X3 404 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 TENM4Q6N022 2769 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 TMEM129A0AVI4 362 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 SLC35F4A4IF30 521 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 ZNF726A6NNF4 738 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 RAB36O95755 333 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 PLGP00747 810 aaPredicted RBP12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 OR2T7P0C7T2 308 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 GABRA1P14867 456 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 KLK2P20151 261 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 C21orf33P30042 268 aaPredicted RBP12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 TTKP33981 857 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 TDGF1P3P51864 188 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 CDH15P55291 814 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 BIDP55957 195 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 ACTC1P68032 377 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 ACTA1P68133 377 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 EMX1Q04741 257 aaPredicted RBP12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 RASGEF1BQ0VAM2 473 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 PCK2Q16822 640 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 NADK2Q4G0N4 442 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 C10orf128Q5T292 105 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 UBE2UQ5VVX9 321 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 XAF1Q6GPH4 301 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 OR2T27Q8NH04 317 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 ZNF845Q96IR2 970 aaPredicted RBP12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 SLX1AQ9BQ83 275 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 ZNF649Q9BS31 505 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 RHNO1Q9BSD3 238 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 LINC00470Q9BZP3 86 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 VCX3AQ9NNX9 186 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 ACOT13Q9NPJ3 140 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 RPRD1BQ9NQG5 326 aaKnown RBP12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 PARPBPQ9NWS1 579 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 ERVK-18Q9QC07 812 aa12.66□□□□□ -0.38
SHMT1P1-201ENST00000419974 CD8B2A6NJW9 211 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 DCTN6O00399 190 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 YES1P07947 543 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 STSP08842 583 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 HSF2Q03933 536 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 GLO1Q04760 184 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 KLRB1Q12918 225 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 MELKQ14680 651 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 GUSBP1Q15486 140 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 KCNMB1Q16558 191 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 NRN1LQ496H8 165 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 KLHL12Q53G59 568 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 SYT6Q5T7P8 510 aaPredicted RBP12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 SLC25A47Q6Q0C1 308 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 FOXL2NBQ6ZUU3 175 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 TIGD4Q8IY51 512 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 C20orf196Q8IYI0 205 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 ACBD7Q8N6N7 88 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 SGCDQ92629 289 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 WNT2BQ93097 391 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 ZNF385AQ96PM9 386 aaKnown RBP12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 YIPF3Q9GZM5 350 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 OR51V1Q9H2C8 321 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 MED20Q9H944 212 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 TNFRSF10DQ9UBN6 386 aa12.65□□□□□ -0.38
SHMT1P1-201ENST00000419974 IGHV3-15A0A0B4J1V0 119 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 A0A1B0GTH9 108 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 SLC22A20A6NK97 555 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 WDR1O75083 606 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 KHDRBS3O75525 346 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms