RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 SLC16A9Q7RTY1 509 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 METTL21AQ8WXB1 218 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 HAVCR1Q96D42 359 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 CXorf58Q96LI9 332 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 NMNAT2Q9BZQ4 307 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 ATG5Q9H1Y0 275 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 XKRYO14609 159 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 ARPC3O15145 178 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 RBBP9O75884 186 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 CXCR1P25024 350 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 CD1CP29017 333 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 RABIFP47224 123 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 GPR139Q6DWJ6 353 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 UNQ9370/PRO34162Q6UXP9 181 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 ATG4DQ86TL0 474 aaPredicted RBP10.78□□□□□ -0.68
LIMK1-202ENST00000418310 PRSS35Q8N3Z0 413 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 GPR119Q8TDV5 335 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 CCDC74AQ96AQ1 378 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 ACTR6Q9GZN1 396 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 ARL6Q9H0F7 186 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 CLEC1BQ9P126 229 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 SCML1Q9UN30 329 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 FARSAQ9Y285 508 aaKnown RBP10.78□□□□□ -0.68
LIMK1-202ENST00000418310 IGHV3-20A0A0C4DH32 117 aa10.77□□□□□ -0.68
LIMK1-202ENST00000418310 KIR2DS5A0A0G2JLQ3 304 aa10.77□□□□□ -0.68
LIMK1-202ENST00000418310 A0A0G2JNG1 304 aa10.77□□□□□ -0.68
LIMK1-202ENST00000418310 SPTY2D1-AS1A0A0U1RR47 76 aa10.77□□□□□ -0.68
LIMK1-202ENST00000418310 KIR2DS3K7RE56 304 aa10.77□□□□□ -0.68
LIMK1-202ENST00000418310 ACOT7O00154 380 aa10.77□□□□□ -0.68
LIMK1-202ENST00000418310 RENP00797 406 aa10.77□□□□□ -0.68
LIMK1-202ENST00000418310 CD3DP04234 171 aa10.77□□□□□ -0.68
LIMK1-202ENST00000418310 KIR2DS5Q14953 304 aa10.77□□□□□ -0.68
LIMK1-202ENST00000418310 ATXN7L3Q14CW9 347 aaPredicted RBP10.77□□□□□ -0.68
LIMK1-202ENST00000418310 ARHGAP40Q5TG30 622 aa10.77□□□□□ -0.68
LIMK1-202ENST00000418310 DCAF12L2Q5VW00 463 aa10.77□□□□□ -0.68
LIMK1-202ENST00000418310 HACD4Q5VWC8 232 aa10.77□□□□□ -0.68
LIMK1-202ENST00000418310 FAM122BQ7Z309 247 aa10.77□□□□□ -0.68
LIMK1-202ENST00000418310 ZNF227Q86WZ6 799 aa10.77□□□□□ -0.68
LIMK1-202ENST00000418310 INTS14Q96SY0 518 aa10.77□□□□□ -0.68
LIMK1-202ENST00000418310 UBQLN4Q9NRR5 601 aa10.77□□□□□ -0.68
LIMK1-202ENST00000418310 AKAP7Q9P0M2 348 aaPredicted RBP10.77□□□□□ -0.68
LIMK1-202ENST00000418310 ANKRD20A5PA0PJZ0 165 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 GSTZ1O43708 216 aaPredicted RBP10.77□□□□□ -0.69
LIMK1-202ENST00000418310 SLC25A12O75746 678 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 ITGA5P08648 1049 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 AANATQ16613 207 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 KLHL26Q53HC5 615 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 FAM69AQ5T7M9 428 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 GLDNQ6ZMI3 551 aaPredicted RBP10.77□□□□□ -0.69
LIMK1-202ENST00000418310 BPHLQ86WA6 291 aaPredicted RBP10.77□□□□□ -0.69
LIMK1-202ENST00000418310 LINC00346Q8IVM7 164 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 ZNF615Q8N8J6 731 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 BOLLQ8N9W6 283 aaKnown RBP10.77□□□□□ -0.69
LIMK1-202ENST00000418310 DUSP19Q8WTR2 217 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 KLHDC7BQ96G42 594 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 MS4A7Q9GZW8 240 aaPredicted RBP10.77□□□□□ -0.69
LIMK1-202ENST00000418310 PRAMEF26H0Y7S4 382 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 SPDEFO95238 335 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 ECDO95905 644 aaPredicted RBP10.77□□□□□ -0.69
LIMK1-202ENST00000418310 IL12BP29460 328 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 YPEL5P62699 121 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 RPS4XP62701 263 aaKnown RBP10.77□□□□□ -0.69
LIMK1-202ENST00000418310 ZNF117Q03924 483 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 SPOCK1Q08629 439 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 SKP2Q13309 424 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 NKPD1Q17RQ9 610 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 SCGB2B2Q4G0G5 96 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 MIB2Q96AX9 1013 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 C7orf50Q9BRJ6 194 aaKnown RBP10.77□□□□□ -0.69
LIMK1-202ENST00000418310 PIPOXQ9P0Z9 390 aa10.77□□□□□ -0.69
LIMK1-202ENST00000418310 OR4C45A6NMZ5 311 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 PNPP00491 289 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 KIR3DL2P43630 455 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 PRTGQ2VWP7 1150 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 BEX5Q5H9J7 111 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 SLC35D3Q5M8T2 416 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 LIN54Q6MZP7 749 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 BIVMQ86UB2 503 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 ZNF595Q8IYB9 648 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 JAGN1Q8N5M9 183 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 GALNT11Q8NCW6 608 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 GPR148Q8TDV2 347 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 HGDQ93099 445 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 FAM131CQ96AQ9 280 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 PTDSS2Q9BVG9 487 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 ZCCHC4Q9H5U6 513 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 EXO5Q9H790 373 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 SYNDIG1Q9H7V2 258 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 HIF3AQ9Y2N7 669 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 TCRBV16S1A1N1A0A5B0 115 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 H0YIG0 161 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 IL11P20809 199 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 ADAM8P78325 824 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 LRFN4Q6PJG9 635 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 CORO6Q6QEF8 472 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 BAIAP2L2Q6UXY1 529 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 C3P1Q6ZMU1 363 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 LRRTM1Q86UE6 522 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 OR51A2Q8NGJ7 313 aa10.76□□□□□ -0.69
LIMK1-202ENST00000418310 FAM46BQ96A09 425 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms