RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 GGNQ86UU5 652 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 CLDN22Q8N7P3 220 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 SLC25A43Q8WUT9 341 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-202ENST00000414700 POTEKPQ9BYX7 375 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 NIPAL2Q9H841 368 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 ZDHHC11Q9H8X9 412 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 TAS2R5Q9NYW4 299 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 LHX6Q9UPM6 363 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 HIF3AQ9Y2N7 669 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 ADAM18Q9Y3Q7 739 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 SPIN1Q9Y657 262 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-202ENST00000414700 V9GYH0 126 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 KALRNO60229 2985 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 ZNF814B7Z6K7 855 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 ACOT7O00154 380 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 BHLHE40O14503 412 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 TNFSF11O14788 317 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 TFECO14948 347 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-202ENST00000414700 ZNHIT1O43257 154 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 OR2T1O43869 369 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 AKR7A3O95154 331 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 MT-ATP6P00846 226 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 F13BP05160 661 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 UQCRC1P31930 480 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 RPL18Q07020 188 aaKnown RBP13.9□□□□□ -0.18
SHMT2-202ENST00000414700 TNK1Q13470 666 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 SLC27A4Q6P1M0 643 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 RDH10Q8IZV5 341 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 KDF1Q8NAX2 398 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-202ENST00000414700 MFSD8Q8NHS3 518 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 GGHQ92820 318 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 OSTF1Q92882 214 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 KLHL21Q9UJP4 597 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 NUP50Q9UKX7 468 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 RCBTB2O95199 551 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 PPP1R3DO95685 299 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 TSPAN19P0C672 248 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 BMP7P18075 431 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 MYL9P24844 172 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 HLA-DMAP28067 261 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 CD83Q01151 205 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.9□□□□□ -0.18
SHMT2-202ENST00000414700 SCN1BQ07699 218 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 SLC10A1Q14973 349 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 MAMDC2Q7Z304 686 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-202ENST00000414700 FAM98AQ8NCA5 519 aaKnown RBP13.9□□□□□ -0.18
SHMT2-202ENST00000414700 IFT27Q9BW83 186 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 MMP28Q9H239 520 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 PCDHGB7Q9Y5F8 929 aa13.9□□□□□ -0.18
SHMT2-202ENST00000414700 A0A1W2PQ09 198 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 C11orf98E9PRG8 122 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 SULT2B1O00204 365 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 EIF1AYO14602 144 aaKnown RBP13.89□□□□□ -0.19
SHMT2-202ENST00000414700 RAMP1O60894 148 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 TPPPO94811 219 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 NDUFB2O95178 105 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 SLC2A10O95528 541 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 PTHP01270 115 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 POU3F2P20265 443 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-202ENST00000414700 TEKQ02763 1124 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 SLC35F1Q5T1Q4 408 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 C12orf73Q69YU5 71 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 TMPPEQ6ZT21 453 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 CREB3L2Q70SY1 520 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 TMEM99Q8N816 258 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 LRRC75AQ8NAA5 344 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 OR2T33Q8NG76 320 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 OR5J2Q8NH18 312 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 DEDD2Q8WXF8 326 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 MIB2Q96AX9 1013 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 KLHL15Q96M94 604 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 WDFY2Q96P53 400 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 TRAF4Q9BUZ4 470 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-202ENST00000414700 SRRQ9GZT4 340 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 NARFLQ9H6Q4 476 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 ACKR4Q9NPB9 350 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 ZNF226Q9NYT6 803 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 TVP23BQ9NYZ1 205 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 ZMIZ1Q9ULJ6 1067 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 GPR52Q9Y2T5 361 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 HDGFL3Q9Y3E1 203 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 RP1L1Q8IWN7 2480 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-202ENST00000414700 GTF3C1Q12789 2109 aa13.89□□□□□ -0.19
SHMT2-202ENST00000414700 SERPINI2O75830 405 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 HIST1H2ABP04908 130 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 HLA-DOBP13765 273 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 AHCYP23526 432 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 GZMKP49863 264 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 LHX2P50458 406 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 SMSP52788 366 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 TAGLNQ01995 201 aaKnown RBP13.88□□□□□ -0.19
SHMT2-202ENST00000414700 SGCBQ16585 318 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 BAK1Q16611 211 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 PGGHGQ32M88 737 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 ALG10Q5BKT4 473 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 C19orf48Q6RUI8 117 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 TMPRSS11AQ6ZMR5 421 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 HIST3H2AQ7L7L0 130 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 BCDIN3DQ7Z5W3 292 aaKnown RBP13.88□□□□□ -0.19
SHMT2-202ENST00000414700 STX19Q8N4C7 294 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms