RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 SGCGQ13326 291 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 RASGRF1Q13972 1273 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 MOGQ16653 247 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 GPAT3Q53EU6 434 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 METTL11BQ5VVY1 283 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 MEDAGQ5VYS4 303 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 METTL21CQ5VZV1 264 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 PRMT9Q6P2P2 845 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 TMED8Q6PL24 325 aaPredicted RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 LYPD2Q6UXB3 125 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 RBPMS2Q6ZRY4 209 aaKnown RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 C7orf65Q6ZTY9 151 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 ZFP82Q8N141 532 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 GALNT15Q8N3T1 639 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 TRIML2Q8N7C3 387 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 OR52L2PQ8NGH6 319 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 OR9A4Q8NGU2 314 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 ITFG1Q8TB96 612 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 CD200R1Q8TD46 325 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 AFG1LQ8WV93 481 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 APH1BQ8WW43 257 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 TCP11Q8WWU5 503 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 RXFP2Q8WXD0 754 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 AQP3Q92482 292 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 TNPO1Q92973 898 aaKnown RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 GLYATL1Q969I3 302 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 RAB7BQ96AH8 199 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 APOBEC3DQ96AK3 386 aaPredicted RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 TIMD4Q96H15 378 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 ALKBH3Q96Q83 286 aaPredicted RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 SERPINI1Q99574 410 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 EIF2AK1Q9BQI3 630 aaKnown RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 TSSK1BQ9BXA7 367 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 MRPL37Q9BZE1 423 aaKnown RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 TM6SF2Q9BZW4 377 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 OR11A1Q9GZK7 315 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 CSNK1G1Q9HCP0 422 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 EXOSC4Q9NPD3 245 aaKnown RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 TBC1D22BQ9NU19 505 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 AGPAT5Q9NUQ2 364 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 IFT57Q9NWB7 429 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 P4HTMQ9NXG6 502 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 GAGE2DQ9UEU5 116 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 C19orf25Q9UFG5 118 aaPredicted RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 RPUSD1Q9UJJ7 312 aaKnown RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 PITPNC1Q9UKF7 332 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 RCOR1Q9UKL0 485 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 PADI2Q9Y2J8 665 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 HBS1LQ9Y450 684 aaKnown RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 TBX22Q9Y458 520 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 PCDHGA2Q9Y5H1 932 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 FKBP7Q9Y680 259 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 GMEB1Q9Y692 573 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 STON1Q9Y6Q2 735 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 U3KQV3 271 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 SETD5Q9C0A6 1442 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 NPC1L1Q9UHC9 1359 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 SCN9AQ15858 1988 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 NKTRP30414 1462 aaKnown RBP-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 TIAM2Q8IVF5 1701 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 TRPM3Q9HCF6 1732 aaPredicted RBP-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 A0A075B6Q4 140 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 TMSB15BA0A087X1C1 80 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 IGHV3-49A0A0A0MS15 119 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 C15orf38-AP3S2A0A0A6YYH1 394 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 OR52A4PA6NMU1 304 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 SNURFLB1AK76 121 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 KIF2AO00139 706 aaPredicted RBP-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 SIRPB1O00241 398 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 TNFRSF11BO00300 401 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 SLC1A7O00341 560 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 CD3EAPO15446 510 aaKnown RBP-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 CFLARO15519 480 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 ST8SIA3O43173 380 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 LYRM1O43325 122 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 PLPP2O43688 288 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 NOL3O60936 208 aaKnown RBP-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 ATP9AO75110 1047 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 HYPMO75409 117 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 ZNF254O75437 659 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 CSDE1O75534 798 aaKnown RBP-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 NOL4O94818 638 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 STAMBPO95630 424 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 MT-CYBP00156 380 aaPredicted RBP-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 GOT2P00505 430 aaKnown RBP-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 AK1P00568 194 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 DNTTP04053 509 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 FGF4P08620 206 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 OR8U8P0C7N1 319 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 CT45A10P0DMU9 189 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 PRPS2P11908 318 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 NEFHP12036 1026 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 F3P13726 295 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 CPMP14384 443 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 COX6B1P14854 86 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 PDE6GP18545 87 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 MALP21145 153 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 AHCYP23526 432 aa-2.13□□□□□ -2.75
RNU4-88P-201ENST00000411220 AK4P27144 223 aaPredicted RBP-2.13□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms