RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CLRN1P58418 232 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 TAS2R41P59536 307 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 MELKQ14680 651 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 RAB39AQ14964 217 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 MAPRE2Q15555 327 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 FXNQ16595 210 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 SLC36A2Q495M3 483 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 MMEL1Q495T6 779 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 TMEM53Q6P2H8 277 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 ERICH5Q6P6B1 374 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 SKA3Q8IX90 412 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 ARIH2OSQ8N7S6 290 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 TMEM120AQ9BXJ8 343 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 TPK1Q9H3S4 243 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 STX18Q9P2W9 335 aaKnown RBP12.7□□□□□ -0.38
CBX3-203ENST00000409747 ZNF346Q9UL40 294 aaKnown RBP12.7□□□□□ -0.38
CBX3-203ENST00000409747 SH3GLB1Q9Y371 365 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.69□□□□□ -0.382e-60■■■■□ 26
CBX3-203ENST00000409747 MCIDASD6RGH6 385 aa12.69□□□□□ -0.38
CBX3-203ENST00000409747 FBP2O00757 339 aa12.69□□□□□ -0.38
CBX3-203ENST00000409747 DHHO43323 396 aa12.69□□□□□ -0.38
CBX3-203ENST00000409747 MGRN1O60291 552 aa12.69□□□□□ -0.38
CBX3-203ENST00000409747 PTHP01270 115 aa12.69□□□□□ -0.38
CBX3-203ENST00000409747 IGF2P01344 180 aa12.69□□□□□ -0.38
CBX3-203ENST00000409747 MT-ND1P03886 318 aa12.69□□□□□ -0.38
CBX3-203ENST00000409747 APEX1P27695 318 aaKnown RBP12.69□□□□□ -0.38
CBX3-203ENST00000409747 DAP3P51398 398 aaKnown RBP12.69□□□□□ -0.38
CBX3-203ENST00000409747 ZNF84P51523 738 aa12.69□□□□□ -0.38
CBX3-203ENST00000409747 SELENOVP59797 346 aa12.69□□□□□ -0.38
CBX3-203ENST00000409747 RIN1Q13671 783 aa12.69□□□□□ -0.38
CBX3-203ENST00000409747 MALRD1Q5VYJ5 2156 aa12.69□□□□□ -0.38
CBX3-203ENST00000409747 CARM1Q86X55 608 aa12.69□□□□□ -0.38
CBX3-203ENST00000409747 LRRC17Q8N6Y2 441 aa12.69□□□□□ -0.38
CBX3-203ENST00000409747 LRRC58Q96CX6 371 aa12.69□□□□□ -0.38
CBX3-203ENST00000409747 SYT3Q9BQG1 590 aa12.69□□□□□ -0.38
CBX3-203ENST00000409747 PRSS27Q9BQR3 290 aa12.69□□□□□ -0.38
CBX3-203ENST00000409747 LRP5LA4QPB2 252 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 BLOC1S5-TXNDC5H3BN57 136 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 OR5F1O95221 314 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 IGFBP1P08833 259 aaPredicted RBP12.68□□□□□ -0.38
CBX3-203ENST00000409747 QDPRP09417 244 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 PCMT1P22061 227 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 CRYBA2P53672 197 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 TSPYL5Q86VY4 417 aaPredicted RBP12.68□□□□□ -0.38
CBX3-203ENST00000409747 CALHM3Q86XJ0 350 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 LINC01356Q8N9X3 169 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 SLC30A7Q8NEW0 376 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 NOXO1Q8NFA2 376 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 SNX18Q96RF0 628 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 RNF121Q9H920 327 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 MEPEQ9NQ76 525 aaPredicted RBP12.68□□□□□ -0.38
CBX3-203ENST00000409747 GPR160Q9UJ42 338 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 A0A1W2PPW3 197 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 LILRA1O75019 489 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 OR7A10O76100 309 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 THRBP10828 461 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 NR2C1P13056 603 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 H2AFXP16104 143 aaPredicted RBP12.68□□□□□ -0.38
CBX3-203ENST00000409747 RPL18Q07020 188 aaKnown RBP12.68□□□□□ -0.38
CBX3-203ENST00000409747 TBC1D28Q2M2D7 210 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 RABL3Q5HYI8 236 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 RGS7BPQ6MZT1 257 aaPredicted RBP12.68□□□□□ -0.38
CBX3-203ENST00000409747 LRFN4Q6PJG9 635 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 DEF8Q6ZN54 512 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 IL17RELQ6ZVW7 336 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 SLC16A14Q7RTX9 510 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 ZNF584Q8IVC4 421 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 PCYOX1LQ8NBM8 494 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 OR4K5Q8NGD3 323 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 OR1J2Q8NGS2 313 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 SH3GL3Q99963 347 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 LRMDAQ9H2I8 198 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 CDH20Q9HBT6 801 aa12.68□□□□□ -0.38
CBX3-203ENST00000409747 FXYD1O00168 92 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 MRASO14807 208 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 PATE4P0C8F1 98 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 FUT1P19526 365 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 ACHEP22303 614 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 IFNA8P32881 189 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 ALDH3B1P43353 468 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 MRPS11P82912 194 aaKnown RBP12.67□□□□□ -0.38
CBX3-203ENST00000409747 PLP2Q04941 152 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 HIST3H3Q16695 136 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 MSMPQ1L6U9 139 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 CR1LQ2VPA4 569 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 TMEM239Q8WW34 195 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 ASB10Q8WXI3 467 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 RDH5Q92781 318 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 MCHR2Q969V1 340 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 SGTBQ96EQ0 304 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 SEPHS2Q99611 448 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 INIPQ9NRY2 104 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 GID8Q9NWU2 228 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 DUSP13Q9UII6 198 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 RIMS3Q9UJD0 308 aa12.67□□□□□ -0.38
CBX3-203ENST00000409747 IQCMA0A1B0GVH7 501 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 HTR3EA5X5Y0 456 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 GMNCA6NCL1 334 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 NPIPB13A6NJU9 1138 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 NPIPB4C9JG80 1138 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms