RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 DHHO43323 396 aa27.15■■□□□ 1.94
TRAF3IP1-203ENST00000409739 STAMBPO95630 424 aa27.15■■□□□ 1.94
TRAF3IP1-203ENST00000409739 IGLV1-44P01699 117 aa27.15■■□□□ 1.94
TRAF3IP1-203ENST00000409739 C3orf36Q3SXR2 165 aa27.15■■□□□ 1.94
TRAF3IP1-203ENST00000409739 FAM169BQ8N8A8 192 aa27.15■■□□□ 1.94
TRAF3IP1-203ENST00000409739 ZNF519Q8TB69 540 aa27.15■■□□□ 1.94
TRAF3IP1-203ENST00000409739 POP5Q969H6 163 aaKnown RBP27.15■■□□□ 1.94
TRAF3IP1-203ENST00000409739 KCNK17Q96T54 332 aa27.15■■□□□ 1.94
TRAF3IP1-203ENST00000409739 GPA33Q99795 319 aa27.15■■□□□ 1.94
TRAF3IP1-203ENST00000409739 KATNB1Q9BVA0 655 aa27.15■■□□□ 1.94
TRAF3IP1-203ENST00000409739 MOV10Q9HCE1 1003 aaKnown RBP27.15■■□□□ 1.94
TRAF3IP1-203ENST00000409739 DNAJC8O75937 253 aaPredicted RBP27.14■■□□□ 1.94
TRAF3IP1-203ENST00000409739 IGKV3-15P01624 115 aa27.14■■□□□ 1.94
TRAF3IP1-203ENST00000409739 CAPZA2P47755 286 aa27.14■■□□□ 1.94
TRAF3IP1-203ENST00000409739 ZNF133P52736 654 aaPredicted RBP27.14■■□□□ 1.94
TRAF3IP1-203ENST00000409739 CHRNB3Q05901 458 aa27.14■■□□□ 1.94
TRAF3IP1-203ENST00000409739 FAM98BQ52LJ0 330 aaKnown RBP27.14■■□□□ 1.94
TRAF3IP1-203ENST00000409739 FAM205BPQ63HN1 556 aa27.14■■□□□ 1.94
TRAF3IP1-203ENST00000409739 B3GLCTQ6Y288 498 aa27.14■■□□□ 1.94
TRAF3IP1-203ENST00000409739 ZER1Q7Z7L7 766 aa27.14■■□□□ 1.94
TRAF3IP1-203ENST00000409739 NMD3Q96D46 503 aaKnown RBP27.14■■□□□ 1.94
TRAF3IP1-203ENST00000409739 TRIM15Q9C019 465 aa27.14■■□□□ 1.94
TRAF3IP1-203ENST00000409739 TMEM38BQ9NVV0 291 aa27.14■■□□□ 1.94
TRAF3IP1-203ENST00000409739 CISD1Q9NZ45 108 aaKnown RBP27.14■■□□□ 1.94
TRAF3IP1-203ENST00000409739 ZNF224Q9NZL3 707 aa27.14■■□□□ 1.94
TRAF3IP1-203ENST00000409739 LYVE1Q9Y5Y7 322 aa27.14■■□□□ 1.94
TRAF3IP1-203ENST00000409739 PTP4A3O75365 173 aa27.13■■□□□ 1.93
TRAF3IP1-203ENST00000409739 CECR9P0C854 216 aa27.13■■□□□ 1.93
TRAF3IP1-203ENST00000409739 CBR1P16152 277 aa27.13■■□□□ 1.93
TRAF3IP1-203ENST00000409739 RPL4P36578 427 aaKnown RBP27.13■■□□□ 1.93
TRAF3IP1-203ENST00000409739 ACVR1BP36896 505 aa27.13■■□□□ 1.93
TRAF3IP1-203ENST00000409739 SPNS3Q6ZMD2 512 aa27.13■■□□□ 1.93
TRAF3IP1-203ENST00000409739 MDP1Q86V88 176 aa27.13■■□□□ 1.93
TRAF3IP1-203ENST00000409739 MYPOPQ86VE0 399 aaPredicted RBP27.13■■□□□ 1.93
TRAF3IP1-203ENST00000409739 ALG12Q9BV10 488 aa27.13■■□□□ 1.93
TRAF3IP1-203ENST00000409739 NDEL1Q9GZM8 345 aa27.13■■□□□ 1.93
TRAF3IP1-203ENST00000409739 SEC61A2Q9H9S3 476 aa27.13■■□□□ 1.93
TRAF3IP1-203ENST00000409739 NOX3Q9HBY0 568 aa27.13■■□□□ 1.93
TRAF3IP1-203ENST00000409739 B3GNT2Q9NY97 397 aa27.13■■□□□ 1.93
TRAF3IP1-203ENST00000409739 POU2F3Q9UKI9 436 aa27.13■■□□□ 1.93
TRAF3IP1-203ENST00000409739 TMCC3Q9ULS5 477 aa27.13■■□□□ 1.93
TRAF3IP1-203ENST00000409739 ADAM18Q9Y3Q7 739 aa27.13■■□□□ 1.93
TRAF3IP1-203ENST00000409739 F8P00451 2351 aa27.12■■□□□ 1.93
TRAF3IP1-203ENST00000409739 UNC119BA6NIH7 251 aa27.12■■□□□ 1.93
TRAF3IP1-203ENST00000409739 ATP6V1G2-DDX39BF2Z307 99 aa27.12■■□□□ 1.93
TRAF3IP1-203ENST00000409739 OR10H3O60404 316 aa27.12■■□□□ 1.93
TRAF3IP1-203ENST00000409739 KRT36O76013 467 aa27.12■■□□□ 1.93
TRAF3IP1-203ENST00000409739 NDUFB2O95178 105 aa27.12■■□□□ 1.93
TRAF3IP1-203ENST00000409739 SLC2A10O95528 541 aa27.12■■□□□ 1.93
TRAF3IP1-203ENST00000409739 HLA-HP01893 362 aa27.12■■□□□ 1.93
TRAF3IP1-203ENST00000409739 CD14P08571 375 aa27.12■■□□□ 1.93
TRAF3IP1-203ENST00000409739 CELA3BP08861 270 aa27.12■■□□□ 1.93
TRAF3IP1-203ENST00000409739 DANCRP0C864 163 aa27.12■■□□□ 1.93
TRAF3IP1-203ENST00000409739 FXYD6P3P58550 94 aa27.12■■□□□ 1.93
TRAF3IP1-203ENST00000409739 ERVK-25P63136 954 aa27.12■■□□□ 1.93
TRAF3IP1-203ENST00000409739 FMODQ06828 376 aa27.12■■□□□ 1.93
TRAF3IP1-203ENST00000409739 CD47Q08722 323 aa27.12■■□□□ 1.93
TRAF3IP1-203ENST00000409739 PGGHGQ32M88 737 aa27.12■■□□□ 1.93
TRAF3IP1-203ENST00000409739 C10orf128Q5T292 105 aa27.12■■□□□ 1.93
TRAF3IP1-203ENST00000409739 SMAP2Q8WU79 429 aaPredicted RBP27.12■■□□□ 1.93
TRAF3IP1-203ENST00000409739 A6NIZ1 184 aa27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 E7EQL1 145 aa27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 SOD3P08294 240 aa27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 IDH3GP51553 393 aaPredicted RBP27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 HMGA2P52926 109 aa27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 RAP1BP61224 184 aa27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 RAP1AP62834 184 aa27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 THSD4Q6ZMP0 1018 aa27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 ADGRG5Q8IZF4 528 aa27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 DEPDC4Q8N2C3 294 aa27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 SLC22A24Q8N4F4 322 aa27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 CLDN22Q8N7P3 220 aa27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 TMEM171Q8WVE6 324 aa27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 NANOS1Q8WY41 292 aaKnown RBP27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 HTRA1Q92743 480 aa27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 GPX7Q96SL4 187 aaPredicted RBP27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 CADM1Q9BY67 442 aaKnown RBP27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 MOKQ9UQ07 419 aa27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 LAMP3Q9UQV4 416 aa27.11■■□□□ 1.93
TRAF3IP1-203ENST00000409739 MED13LQ71F56 2210 aa27.1■■□□□ 1.93
TRAF3IP1-203ENST00000409739 IGKV1D-43A0A0B4J1Z2 117 aa27.1■■□□□ 1.93
TRAF3IP1-203ENST00000409739 AQP12BA6NM10 295 aa27.1■■□□□ 1.93
TRAF3IP1-203ENST00000409739 SMPD2O60906 423 aa27.1■■□□□ 1.93
TRAF3IP1-203ENST00000409739 RAP2AP10114 183 aa27.1■■□□□ 1.93
TRAF3IP1-203ENST00000409739 CD79AP11912 226 aa27.1■■□□□ 1.93
TRAF3IP1-203ENST00000409739 NR2C1P13056 603 aa27.1■■□□□ 1.93
TRAF3IP1-203ENST00000409739 ARR3P36575 388 aa27.1■■□□□ 1.93
TRAF3IP1-203ENST00000409739 ZNF84P51523 738 aa27.1■■□□□ 1.93
TRAF3IP1-203ENST00000409739 NPRL3Q12980 569 aa27.1■■□□□ 1.93
TRAF3IP1-203ENST00000409739 FAM122BQ7Z309 247 aa27.1■■□□□ 1.93
TRAF3IP1-203ENST00000409739 SKA3Q8IX90 412 aa27.1■■□□□ 1.93
TRAF3IP1-203ENST00000409739 AQP12AQ8IXF9 295 aa27.1■■□□□ 1.93
TRAF3IP1-203ENST00000409739 ARIH2OSQ8N7S6 290 aa27.1■■□□□ 1.93
TRAF3IP1-203ENST00000409739 OR4C15Q8NGM1 316 aa27.1■■□□□ 1.93
TRAF3IP1-203ENST00000409739 Q96M85 177 aa27.1■■□□□ 1.93
TRAF3IP1-203ENST00000409739 SMURF2Q9HAU4 748 aa27.1■■□□□ 1.93
TRAF3IP1-203ENST00000409739 HIVEP1P15822 2718 aa27.1■■□□□ 1.93
TRAF3IP1-203ENST00000409739 TNFRSF11BO00300 401 aa27.09■■□□□ 1.93
TRAF3IP1-203ENST00000409739 GSC2O15499 205 aa27.09■■□□□ 1.93
TRAF3IP1-203ENST00000409739 OR8G3PP0DMU2 310 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms