RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 CCRL2O00421 344 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 TNFSF11O14788 317 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 GABARAPO95166 117 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 PYCR1P32322 319 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 RGS6P49758 472 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 AGFG1P52594 562 aaKnown RBP18.76■□□□□ 0.59
TPM1-208ENST00000404484 LCN6P62502 163 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 PPIAP62937 165 aaKnown RBP18.76■□□□□ 0.59
TPM1-208ENST00000404484 GALEQ14376 348 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 POU4F3Q15319 338 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 TIMM50Q3ZCQ8 353 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 LINC01590Q5TEZ4 76 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 HBMQ6B0K9 141 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 IGFL3Q6UXB1 125 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 GPAT4Q86UL3 456 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 GGNQ86UU5 652 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 FAM109AQ8N4B1 249 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 OR51L1Q8NGJ5 315 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 OR2V1Q8NHB1 315 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 C12orf43Q96C57 262 aaKnown RBP18.76■□□□□ 0.59
TPM1-208ENST00000404484 NMD3Q96D46 503 aaKnown RBP18.76■□□□□ 0.59
TPM1-208ENST00000404484 ALG8Q9BVK2 526 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 SRA1Q9HD15 236 aaKnown RBP18.76■□□□□ 0.59
TPM1-208ENST00000404484 RP1L1Q8IWN7 2480 aaPredicted RBP18.75■□□□□ 0.59
TPM1-208ENST00000404484 FAM166BA8MTA8 275 aa18.75■□□□□ 0.59
TPM1-208ENST00000404484 EIF1AYO14602 144 aaKnown RBP18.75■□□□□ 0.59
TPM1-208ENST00000404484 PLA2G2AP14555 144 aa18.75■□□□□ 0.59
TPM1-208ENST00000404484 TGFBR2P37173 567 aa18.75■□□□□ 0.59
TPM1-208ENST00000404484 LIPAP38571 399 aa18.75■□□□□ 0.59
TPM1-208ENST00000404484 RFC3P40938 356 aa18.75■□□□□ 0.59
TPM1-208ENST00000404484 MAGEA5P43359 124 aa18.75■□□□□ 0.59
TPM1-208ENST00000404484 HSF2Q03933 536 aa18.75■□□□□ 0.59
TPM1-208ENST00000404484 ZBTB46Q86UZ6 589 aa18.75■□□□□ 0.59
TPM1-208ENST00000404484 OR6V1Q8N148 313 aa18.75■□□□□ 0.59
TPM1-208ENST00000404484 ADAD1Q96M93 576 aaKnown RBP18.75■□□□□ 0.59
TPM1-208ENST00000404484 OPALINQ96PE5 141 aa18.75■□□□□ 0.59
TPM1-208ENST00000404484 MNTQ99583 582 aa18.75■□□□□ 0.59
TPM1-208ENST00000404484 MFRPQ9BY79 579 aa18.75■□□□□ 0.59
TPM1-208ENST00000404484 PTTG2Q9NZH5 202 aa18.75■□□□□ 0.59
TPM1-208ENST00000404484 TRAF3IP2O43734 574 aaPredicted RBP18.74■□□□□ 0.59
TPM1-208ENST00000404484 AKAP8O43823 692 aaKnown RBP18.74■□□□□ 0.59
TPM1-208ENST00000404484 ENPP1P22413 925 aa18.74■□□□□ 0.59
TPM1-208ENST00000404484 SH3BGRP55822 239 aaPredicted RBP18.74■□□□□ 0.59
TPM1-208ENST00000404484 CLDN20P56880 219 aa18.74■□□□□ 0.59
TPM1-208ENST00000404484 CARD18P57730 90 aa18.74■□□□□ 0.59
TPM1-208ENST00000404484 ACTA2P62736 377 aa18.74■□□□□ 0.59
TPM1-208ENST00000404484 ACTG2P63267 376 aa18.74■□□□□ 0.59
TPM1-208ENST00000404484 TSTQ16762 297 aaKnown RBP18.74■□□□□ 0.59
TPM1-208ENST00000404484 ZNF322Q6U7Q0 402 aaPredicted RBP18.74■□□□□ 0.59
TPM1-208ENST00000404484 SLC16A9Q7RTY1 509 aa18.74■□□□□ 0.59
TPM1-208ENST00000404484 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.74■□□□□ 0.59
TPM1-208ENST00000404484 SLC35F2Q8IXU6 374 aa18.74■□□□□ 0.59
TPM1-208ENST00000404484 FNDC8Q8TC99 324 aa18.74■□□□□ 0.59
TPM1-208ENST00000404484 TSSK2Q96PF2 358 aa18.74■□□□□ 0.59
TPM1-208ENST00000404484 KCNK17Q96T54 332 aa18.74■□□□□ 0.59
TPM1-208ENST00000404484 ZNF649Q9BS31 505 aa18.74■□□□□ 0.59
TPM1-208ENST00000404484 NUAK2Q9H093 628 aa18.74■□□□□ 0.59
TPM1-208ENST00000404484 TSPAN10Q9H1Z9 355 aaPredicted RBP18.74■□□□□ 0.59
TPM1-208ENST00000404484 ACKR4Q9NPB9 350 aa18.74■□□□□ 0.59
TPM1-208ENST00000404484 B9D1Q9UPM9 204 aa18.74■□□□□ 0.59
TPM1-208ENST00000404484 NCKAP5O14513 1909 aa18.74■□□□□ 0.59
TPM1-208ENST00000404484 FREM3P0C091 2139 aa18.73■□□□□ 0.59
TPM1-208ENST00000404484 CENPBD1B2RD01 187 aa18.73■□□□□ 0.59
TPM1-208ENST00000404484 NR2C1P13056 603 aa18.73■□□□□ 0.59
TPM1-208ENST00000404484 BIDP55957 195 aa18.73■□□□□ 0.59
TPM1-208ENST00000404484 ACSM1Q08AH1 577 aa18.73■□□□□ 0.59
TPM1-208ENST00000404484 SLC10A1Q14973 349 aa18.73■□□□□ 0.59
TPM1-208ENST00000404484 OR2G6Q5TZ20 316 aa18.73■□□□□ 0.59
TPM1-208ENST00000404484 NHLRC1Q6VVB1 395 aa18.73■□□□□ 0.59
TPM1-208ENST00000404484 SLC16A12Q6ZSM3 486 aa18.73■□□□□ 0.59
TPM1-208ENST00000404484 OR6X1Q8NH79 312 aa18.73■□□□□ 0.59
TPM1-208ENST00000404484 CPNE4Q96A23 557 aaPredicted RBP18.73■□□□□ 0.59
TPM1-208ENST00000404484 ADGRG7Q96K78 797 aa18.73■□□□□ 0.59
TPM1-208ENST00000404484 SF3B5Q9BWJ5 86 aaKnown RBP18.73■□□□□ 0.59
TPM1-208ENST00000404484 NAA50Q9GZZ1 169 aaKnown RBP18.73■□□□□ 0.59
TPM1-208ENST00000404484 MED29Q9NX70 200 aa18.73■□□□□ 0.59
TPM1-208ENST00000404484 SLC22A1O15245 554 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 SLC16A7O60669 478 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 IGHG1P01857 330 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 NAA10P41227 235 aaPredicted RBP18.72■□□□□ 0.59
TPM1-208ENST00000404484 BDH1Q02338 343 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 BCL2A1Q16548 175 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 ZADH2Q8N4Q0 377 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 MEIOBQ8N635 442 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 ZNF485Q8NCK3 441 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 ZNRF4Q8WWF5 429 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 GATAD2BQ8WXI9 593 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 SLC25A44Q96H78 314 aaPredicted RBP18.72■□□□□ 0.59
TPM1-208ENST00000404484 TXNDC15Q96J42 360 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 RBP7Q96R05 134 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 TBX5Q99593 518 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 RERGLQ9H628 205 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 ZNF726A6NNF4 738 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 ZNF814B7Z6K7 855 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 NPIPA2E9PIF3 369 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 NPIPA3F8WFD2 350 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 DCTN6O00399 190 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 ACTL6AO96019 429 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 MT-ND5P03915 603 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 CPEP16870 476 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms