RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 GPR171O14626 319 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 APOBEC1P41238 236 aaKnown RBP16.68■□□□□ 0.26
COL18A1-204ENST00000400337 RBPJQ06330 500 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 SMAD4Q13485 552 aaKnown RBP16.68■□□□□ 0.26
COL18A1-204ENST00000400337 SOWAHCQ53LP3 525 aaPredicted RBP16.68■□□□□ 0.26
COL18A1-204ENST00000400337 PTOV1Q86YD1 416 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 SIRT6Q8N6T7 355 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 PHYHIPQ92561 330 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 PIGTQ969N2 578 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 GABARAPL1Q9H0R8 117 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 KLRC4-KLRK1H3BQV0 150 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 TIMM8AO60220 97 aaPredicted RBP16.68■□□□□ 0.26
COL18A1-204ENST00000400337 HCCSP53701 268 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 VASH1Q7L8A9 365 aaPredicted RBP16.68■□□□□ 0.26
COL18A1-204ENST00000400337 TMEM178AQ8NBL3 297 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 STK35Q8TDR2 534 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 DVL3Q92997 716 aaPredicted RBP16.68■□□□□ 0.26
COL18A1-204ENST00000400337 SEC22AQ96IW7 307 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 SNX18Q96RF0 628 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 CSF3RQ99062 836 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 C19orf43Q9BQ61 176 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 SLC22A23A1A5C7 686 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 ITGB2P05107 769 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 HIST1H1CP16403 213 aaKnown RBP16.67■□□□□ 0.26
COL18A1-204ENST00000400337 IHHQ14623 411 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 BCL2A1Q16548 175 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 PAQR6Q6TCH4 344 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 C16orf52Q8NHV5 167 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 C8orf44Q96CB5 159 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 SSC5DA1L4H1 1573 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 TMEM221A6NGB7 291 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 PIPP12273 146 aaPredicted RBP16.67■□□□□ 0.26
COL18A1-204ENST00000400337 GALEQ14376 348 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 ZNF169Q14929 603 aaPredicted RBP16.67■□□□□ 0.26
COL18A1-204ENST00000400337 YOD1Q5VVQ6 348 aaPredicted RBP16.67■□□□□ 0.26
COL18A1-204ENST00000400337 LIPNQ5VXI9 398 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 GJC3Q8NFK1 279 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 DUS3LQ96G46 650 aaKnown RBP16.67■□□□□ 0.26
COL18A1-204ENST00000400337 GABARAPL3Q9BY60 117 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 LHX6Q9UPM6 363 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 ETV7Q9Y603 341 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 CEBPZOSA8MTT3 80 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 GFERP55789 205 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 SLC25A43Q8WUT9 341 aaPredicted RBP16.67■□□□□ 0.26
COL18A1-204ENST00000400337 THOC3Q96J01 351 aaKnown RBP16.67■□□□□ 0.26
COL18A1-204ENST00000400337 DCBLD2Q96PD2 775 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 TCRBP04435 133 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 RPP30P78346 268 aaKnown RBP16.67■□□□□ 0.26
COL18A1-204ENST00000400337 KCNJ8Q15842 424 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 PRTGQ2VWP7 1150 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 STEAP1BQ6NZ63 245 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 ZAR1LA6NP61 321 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 IGHV3-9P01782 118 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 MSR1P21757 451 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 PPICP45877 212 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 FAM219BQ5XKK7 198 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 PGAP1Q75T13 922 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 OR6M1Q8NGM8 313 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 KCNJ16Q9NPI9 418 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 FBXL2Q9UKC9 423 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 OR51B4Q9Y5P0 310 aa16.67■□□□□ 0.26
COL18A1-204ENST00000400337 C1orf196B1AJZ1 125 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 CCR6P51684 374 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 GPR85P60893 370 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 RAB4BP61018 213 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 RUNX2Q13950 521 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 CAMKMTQ7Z624 323 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 SYT9Q86SS6 491 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 SLAMF9Q96A28 289 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 GON7Q9BXV9 100 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 SLC25A31Q9H0C2 315 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 CMC2Q9NRP2 79 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 LOC100289279A0A1B0GTE1 492 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 M0QYG6 137 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 IFNA4P05014 189 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 ATP1B1P05026 303 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 HOXD12P35452 270 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 BHLHA9Q7RTU4 235 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 TMEM179BQ7Z7N9 219 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 RIMKLAQ8IXN7 391 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 CGGBP1Q9UFW8 167 aaPredicted RBP16.66■□□□□ 0.26
COL18A1-204ENST00000400337 FAM166BA8MTA8 275 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 C2CD4DB7Z1M9 353 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 D6RAR5 112 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 H0YIG0 161 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 GPR137BO60478 399 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 RAB6AP20340 208 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 ALDH3B1P43353 468 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 GP2P55259 537 aaKnown RBP16.66■□□□□ 0.26
COL18A1-204ENST00000400337 SECTM1Q8WVN6 248 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 C12orf49Q9H741 205 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 BCL2L10Q9HD36 194 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 GCM1Q9NP62 436 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 FBXO24O75426 580 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 CPT2P23786 658 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 CD79BP40259 229 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 MAP2K6P52564 334 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 TEKQ02763 1124 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 ADGRE4PQ86SQ3 457 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 CNRIP1Q96F85 164 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms