RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 INO80CQ6PI98 192 aaPredicted RBP10.42□□□□□ -0.74
SKA3-203ENST00000400018 UNQ6494/PRO21346Q6UXR6 183 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 H1FNTQ75WM6 255 aaPredicted RBP10.42□□□□□ -0.74
SKA3-203ENST00000400018 OR52I1Q8NGK6 324 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 GATAD2BQ8WXI9 593 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 TEAD3Q99594 435 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 COQ7Q99807 217 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 POLR2J2Q9GZM3 115 aaKnown RBP10.42□□□□□ -0.74
SKA3-203ENST00000400018 CHST11Q9NPF2 352 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 FKBP14Q9NWM8 211 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 ZNF229Q9UJW7 825 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 CAMK2AQ9UQM7 478 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 KLF13Q9Y2Y9 288 aaPredicted RBP10.42□□□□□ -0.74
SKA3-203ENST00000400018 GRIP1Q9Y3R0 1128 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 UTP20O75691 2785 aaKnown RBP10.42□□□□□ -0.74
SKA3-203ENST00000400018 SMIM30A4D0T7 59 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 RIIAD1A6NNX1 92 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 KLRC4-KLRK1H3BQV0 150 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 MTRF1O75570 445 aaKnown RBP10.42□□□□□ -0.74
SKA3-203ENST00000400018 TGM6O95932 706 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 LALBAP00709 142 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 HLA-DQA2P01906 255 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 TFP02787 698 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 LHX2P50458 406 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 SUMO3P55854 103 aaPredicted RBP10.42□□□□□ -0.74
SKA3-203ENST00000400018 NFATC3Q12968 1075 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 RAB39AQ14964 217 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 ZSWIM7Q19AV6 140 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 ODF4Q2M2E3 257 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 NIPAL3Q6P499 406 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 LINC00346Q8IVM7 164 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 OR10H4Q8NGA5 316 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 ZCCHC14Q8WYQ9 949 aaKnown RBP10.42□□□□□ -0.74
SKA3-203ENST00000400018 RPL3LQ92901 407 aaKnown RBP10.42□□□□□ -0.74
SKA3-203ENST00000400018 ZBTB8AQ96BR9 441 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 AMELYQ99218 206 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 POLE4Q9NR33 117 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 COPS3Q9UNS2 423 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 LHX6Q9UPM6 363 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 KLHDC2Q9Y2U9 406 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 NCOA6Q14686 2063 aaPredicted RBP10.42□□□□□ -0.74
SKA3-203ENST00000400018 A0A087WXM4 84 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 CCDC182A6NF36 153 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 RGS13O14921 159 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 PATE4P0C8F1 98 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 SPI1P17947 270 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 MAGEB1P43366 347 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 HTR3AP46098 478 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 MTNR1AP48039 350 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 IFITM3Q01628 133 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 SLC10A1Q14973 349 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 SLC25A53Q5H9E4 307 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 VASNQ6EMK4 673 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 JAZF1Q86VZ6 243 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 ZFP62Q8NB50 900 aaPredicted RBP10.42□□□□□ -0.74
SKA3-203ENST00000400018 TMEM203Q969S6 136 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 SLC19A3Q9BZV2 496 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 ROS1P08922 2347 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 INTS1Q8N201 2190 aaKnown RBP10.41□□□□□ -0.74
SKA3-203ENST00000400018 CENPBD1B2RD01 187 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 M0R3G1 203 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 GLSO94925 669 aaPredicted RBP10.41□□□□□ -0.74
SKA3-203ENST00000400018 PCMT1P22061 227 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 ANOS1P23352 680 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 DCKP27707 260 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 SDHAP31040 664 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 OPRL1P41146 370 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 P2RX3P56373 397 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 CLDN18P56856 261 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 RAC1P63000 192 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 DPY19L2P2Q6ZN68 376 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 FAM26EQ8N5C1 309 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 PROKR2Q8NFJ6 384 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 MFSD8Q8NHS3 518 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 STK35Q8TDR2 534 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 FAR1Q8WVX9 515 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 MIB2Q96AX9 1013 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 SCMH1Q96GD3 660 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 TIMP4Q99727 224 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 DUSP21Q9H596 190 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 C12orf49Q9H741 205 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 SCN3BQ9NY72 215 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 H2AFY2Q9P0M6 372 aaPredicted RBP10.41□□□□□ -0.74
SKA3-203ENST00000400018 COA3Q9Y2R0 106 aaPredicted RBP10.41□□□□□ -0.74
SKA3-203ENST00000400018 POLEQ07864 2286 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 RGS10O43665 173 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 BCL10O95999 233 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 ZNF3P17036 446 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 GRK5P34947 590 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 GP2P55259 537 aaKnown RBP10.41□□□□□ -0.74
SKA3-203ENST00000400018 CTAG1AP78358 180 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 C1DQ13901 141 aaKnown RBP10.41□□□□□ -0.74
SKA3-203ENST00000400018 ASB18Q6ZVZ8 466 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 ELMOD2Q8IZ81 293 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 ZADH2Q8N4Q0 377 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 PPP1R14AQ96A00 147 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 ALKBH3Q96Q83 286 aaPredicted RBP10.41□□□□□ -0.74
SKA3-203ENST00000400018 DOK1Q99704 481 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 CALHM2Q9HA72 323 aa10.41□□□□□ -0.74
SKA3-203ENST00000400018 SPEF1Q9Y4P9 236 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms