RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 A4GALTQ9NPC4 353 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 BPIFB2Q8N4F0 458 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 GHSRQ92847 366 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 EVA1AQ9H8M9 152 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 QPCTLQ9NXS2 382 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 LCMT2O60294 686 aaKnown RBP10.42□□□□□ -0.74
TTC28-201ENST00000397906 PLA2G7Q13093 441 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 IER2Q9BTL4 223 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 DHRS4Q9BTZ2 278 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 AMBRA1Q9C0C7 1298 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 CNOT11Q9UKZ1 510 aaKnown RBP10.42□□□□□ -0.74
TTC28-201ENST00000397906 GSK3AP49840 483 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 HCCSP53701 268 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 RPS25P62851 125 aaKnown RBP10.42□□□□□ -0.74
TTC28-201ENST00000397906 DPY19L2P2Q6ZN68 376 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 PDZD9Q8IXQ8 264 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 OPRL1P41146 370 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 HTR2BP41595 481 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 Q6ZTK2 550 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 TCEAL2Q9H3H9 227 aaPredicted RBP10.42□□□□□ -0.74
TTC28-201ENST00000397906 INPP5EQ9NRR6 644 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 A0A1W2PR48 441 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 DPM1O60762 260 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 ATPAF1Q5TC12 328 aaPredicted RBP10.42□□□□□ -0.74
TTC28-201ENST00000397906 OTPQ5XKR4 325 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 SSX9Q7RTT3 188 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 IP6K3Q96PC2 410 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 SARGQ9BW04 601 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 OPA3Q9H6K4 179 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 NUBP2Q9Y5Y2 271 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 TARM1B6A8C7 271 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 GAPDHSO14556 408 aaPredicted RBP10.42□□□□□ -0.74
TTC28-201ENST00000397906 CXCL10P02778 98 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 ZNF93P35789 620 aaPredicted RBP10.42□□□□□ -0.74
TTC28-201ENST00000397906 EMX1Q04741 257 aaPredicted RBP10.42□□□□□ -0.74
TTC28-201ENST00000397906 RBM45Q8IUH3 476 aaKnown RBP10.42□□□□□ -0.74
TTC28-201ENST00000397906 RDH10Q8IZV5 341 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 PAQR8Q8TEZ7 354 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 OR52A1Q9UKL2 312 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 CORINQ9Y5Q5 1042 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 LAMA4Q16363 1823 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 MRPS34P82930 218 aaKnown RBP10.41□□□□□ -0.74
TTC28-201ENST00000397906 SLC35A4Q96G79 324 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 NMNAT2Q9BZQ4 307 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 CTSFQ9UBX1 484 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 NOTOA8MTQ0 251 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 TAS2R19P59542 299 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 CAMK2BQ13554 666 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 ZNF529Q6P280 563 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.41□□□□□ -0.74
TTC28-201ENST00000397906 RTL8AQ9BWD3 113 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 GABARAPH6UMI1 98 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 GABARAPO95166 117 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 ZNF91Q05481 1191 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 DVL3Q92997 716 aaPredicted RBP10.41□□□□□ -0.74
TTC28-201ENST00000397906 RNF170Q96K19 258 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 TAAR9Q96RI9 348 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 PTTG3PQ9NZH4 202 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 SIRPB1O00241 398 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 FZD7O75084 574 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 METAP1P53582 386 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 MRI1Q9BV20 369 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 SLC5A10A0PJK1 596 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 EDIL3O43854 480 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 UBCP0CG48 685 aaKnown RBP10.41□□□□□ -0.74
TTC28-201ENST00000397906 TEKQ02763 1124 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 SSX2Q16385 188 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 PHLDA2Q53GA4 152 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 SPATA46Q5T0L3 261 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 METAP1DQ6UB28 335 aaPredicted RBP10.41□□□□□ -0.74
TTC28-201ENST00000397906 ROBO4Q8WZ75 1007 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 GIMAP5Q96F15 307 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 SLC25A31Q9H0C2 315 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 OGFOD3Q6PK18 319 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 ZDHHC16Q969W1 377 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 SARAFQ96BY9 339 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 CSF3RQ99062 836 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 ZFP57Q9NU63 452 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 SLC22A20A6NK97 555 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 CXCL13O43927 109 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 TBXA2RP21731 343 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 TRIM23P36406 574 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 LSMEM2Q8N112 164 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 C12orf45Q8N5I9 185 aaPredicted RBP10.41□□□□□ -0.74
TTC28-201ENST00000397906 FNDC8Q8TC99 324 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 ZFP90Q8TF47 636 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 PLCXD1Q9NUJ7 323 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 RCE1Q9Y256 329 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 PAPPA2Q9BXP8 1791 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 ATP6V1G1O75348 118 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 YIF1AO95070 293 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 GIPRP48546 466 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 RPS23P62266 143 aaKnown RBP10.41□□□□□ -0.74
TTC28-201ENST00000397906 TCTN3Q6NUS6 607 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 S100A7AQ86SG5 101 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 LGALS14Q8TCE9 139 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 GAB3Q8WWW8 586 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 ANKRD9Q96BM1 317 aaPredicted RBP10.41□□□□□ -0.74
TTC28-201ENST00000397906 BANF2Q9H503 90 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 SCN7AQ01118 1682 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms