RNA–Protein interactions for RNA: ENST00000395986.6

BDNF-207, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 3,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-207ENST00000395986 FBXO44Q9H4M3 255 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 SFXN1Q9H9B4 322 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 C20orf141Q9NUB4 165 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 STEAP1Q9UHE8 339 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 IKZF2Q9UKS7 526 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 HSF4Q9ULV5 492 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 KCNIP3Q9Y2W7 256 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 WDR90Q96KV7 1748 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 ALPK3Q96L96 1907 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 C9orf170A2RU37 121 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 SMCO3A2RU48 225 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 NPC1O15118 1278 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 OR1F1O43749 312 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 FCMRO60667 390 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 ADAP1O75689 374 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 OR2F2O95006 317 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 TSPAN15O95858 294 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 IFNGR2P38484 337 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 DHPSP49366 369 aaPredicted RBP6.73□□□□□ -1.33
BDNF-207ENST00000395986 PKIAP61925 76 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 CXADRP78310 365 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 OR2F1Q13607 317 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 NR0B2Q15466 257 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 CXCL17Q6UXB2 119 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 ZNF705AQ6ZN79 300 aaPredicted RBP6.73□□□□□ -1.33
BDNF-207ENST00000395986 RRNAD1Q96FB5 475 aaKnown RBP6.73□□□□□ -1.33
BDNF-207ENST00000395986 SLC35G5Q96KT7 338 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 TIMP4Q99727 224 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 MMP26Q9NRE1 261 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 MRPL17Q9NRX2 175 aaKnown RBP6.73□□□□□ -1.33
BDNF-207ENST00000395986 PARPBPQ9NWS1 579 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 MRPS33Q9Y291 106 aaKnown RBP6.73□□□□□ -1.33
BDNF-207ENST00000395986 ARL5CA6NH57 179 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 SCGB1D2O95969 90 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 IL5P05113 134 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 CHRM4P08173 479 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 HOXC4P09017 264 aaPredicted RBP6.73□□□□□ -1.33
BDNF-207ENST00000395986 TUBG1P23258 451 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 ST3GAL3Q11203 375 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 ENTPD8Q5MY95 495 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 CDCP2Q5VXM1 449 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 PWWP2BQ6NUJ5 590 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 P4HA3Q7Z4N8 544 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 LRRC56Q8IYG6 542 aaPredicted RBP6.73□□□□□ -1.33
BDNF-207ENST00000395986 AMER3Q8N944 861 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 CHST4Q8NCG5 386 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 OR52E2Q8NGJ4 325 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 ASB11Q8WXH4 323 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 MR1Q95460 341 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 PELI1Q96FA3 418 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 TUBA4BQ9H853 241 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 SCN5AQ14524 2016 aa6.73□□□□□ -1.33
BDNF-207ENST00000395986 FAM221BA6H8Z2 402 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 NPIPB15A6NHN6 443 aaPredicted RBP6.72□□□□□ -1.33
BDNF-207ENST00000395986 SLC33A1O00400 549 aaPredicted RBP6.72□□□□□ -1.33
BDNF-207ENST00000395986 GAPDHSO14556 408 aaPredicted RBP6.72□□□□□ -1.33
BDNF-207ENST00000395986 PIN1P1O15428 100 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 ZNF354AO60765 605 aaPredicted RBP6.72□□□□□ -1.33
BDNF-207ENST00000395986 SCGNO76038 276 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 SBK2P0C263 348 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 PBX2P40425 430 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 CDX1P47902 265 aaPredicted RBP6.72□□□□□ -1.33
BDNF-207ENST00000395986 ASCL1P50553 236 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 RAP1AP62834 184 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 ZNF85Q03923 595 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 PPP1R1AQ13522 171 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 SLC22A6Q4U2R8 563 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 PRSS55Q6UWB4 352 aaPredicted RBP6.72□□□□□ -1.33
BDNF-207ENST00000395986 LANCL3Q6ZV70 420 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 RNF44Q7L0R7 432 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 ZNF683Q8IZ20 524 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 OR4K14Q8NGD5 310 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 OR51F2Q8NH61 342 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 SMPDL3AQ92484 453 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 PIK3IP1Q96FE7 263 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 DTD2Q96FN9 168 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 PACRGQ96M98 296 aaPredicted RBP6.72□□□□□ -1.33
BDNF-207ENST00000395986 C16orf70Q9BSU1 422 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 SLC12A9Q9BXP2 914 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 NRIP3Q9NQ35 241 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 P2RX2Q9UBL9 471 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 HEATR5BQ9P2D3 2071 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 C5orf42Q9H799 3197 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 TGIF2-C20orf24A0A0A6YYL0 155 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 CBY3A6NI87 242 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 OR52A4PA6NMU1 304 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 RRP8O43159 456 aaKnown RBP6.72□□□□□ -1.33
BDNF-207ENST00000395986 GJB5O95377 273 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 EPPINO95925 133 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 HMGN2P05204 90 aaKnown RBP6.72□□□□□ -1.33
BDNF-207ENST00000395986 OR8G3PP0DMU2 310 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 NID1P14543 1247 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 SERPINF1P36955 418 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 CD200P41217 278 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 TFPI2P48307 235 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 NCBP2P52298 156 aaKnown RBP eCLIP6.72□□□□□ -1.33
BDNF-207ENST00000395986 YBEYP58557 167 aaPredicted RBP6.72□□□□□ -1.33
BDNF-207ENST00000395986 MRPS6P82932 125 aaKnown RBP6.72□□□□□ -1.33
BDNF-207ENST00000395986 B4GALNT1Q00973 533 aa6.72□□□□□ -1.33
BDNF-207ENST00000395986 DMRTC1Q5HYR2 192 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms