RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 POLR2J3Q9H1A7 115 aaKnown RBP5.33□□□□□ -1.56
PTPN20-208ENST00000395727 DENND2DQ9H6A0 471 aaPredicted RBP5.33□□□□□ -1.56
PTPN20-208ENST00000395727 ZNF442Q9H7R0 627 aa5.33□□□□□ -1.56
PTPN20-208ENST00000395727 TMEM27Q9HBJ8 222 aa5.33□□□□□ -1.56
PTPN20-208ENST00000395727 MRPL39Q9NYK5 338 aaKnown RBP5.33□□□□□ -1.56
PTPN20-208ENST00000395727 NOX1Q9Y5S8 564 aa5.33□□□□□ -1.56
PTPN20-208ENST00000395727 ABCA2Q9BZC7 2435 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 IGHV1-18A0A0C4DH31 117 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 KRTAP9-7A8MTY7 169 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 BBIP1A8MTZ0 92 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 ZNF99A8MXY4 864 aaPredicted RBP5.32□□□□□ -1.56
PTPN20-208ENST00000395727 M0R1B8 84 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 FXYD1O00168 92 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 NDUFS8O00217 210 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 SLC22A2O15244 555 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 TPST2O60704 377 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 BGLAPP02818 100 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 CLEC2LP0C7M8 214 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 CBR1P16152 277 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 SLC25A16P16260 332 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 GRPRP30550 384 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 PCGF2P35227 344 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 ARR3P36575 388 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 ACVR1BP36896 505 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 CDKN1AP38936 164 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 GZMMP51124 257 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 CDH12P55289 794 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 CLDN17P56750 224 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 UBE2NP61088 152 aaKnown RBP5.32□□□□□ -1.56
PTPN20-208ENST00000395727 PPP2R2BQ00005 443 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 HOXC5Q00444 222 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 ROR2Q01974 943 aaKnown RBP5.32□□□□□ -1.56
PTPN20-208ENST00000395727 CHRNB3Q05901 458 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 LOXL1Q08397 574 aaPredicted RBP5.32□□□□□ -1.56
PTPN20-208ENST00000395727 DMTNQ08495 405 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 PUDPQ08623 228 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 SPOCK1Q08629 439 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 TRIM25Q14258 630 aaKnown RBP5.32□□□□□ -1.56
PTPN20-208ENST00000395727 OR1Q1Q15612 314 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 DUSP7Q16829 419 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 TRMT5Q32P41 509 aaKnown RBP5.32□□□□□ -1.56
PTPN20-208ENST00000395727 NRN1LQ496H8 165 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 HIKESHIQ53FT3 197 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 HMBOX1Q6NT76 420 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 NIPAL3Q6P499 406 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 LINGO2Q7L985 606 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 PXKQ7Z7A4 578 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 SNX32Q86XE0 403 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 CALHM3Q86XJ0 350 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 GPR137CQ8N3F9 429 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 NUP37Q8NFH4 326 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 IL17RDQ8NFM7 739 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 OR4F15Q8NGB8 312 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 OR8J3Q8NGG0 315 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 ADAMTS16Q8TE57 1224 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 PROX1Q92786 737 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 DNAJA3Q96EY1 480 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 MPP4Q96JB8 637 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 ALKBH3Q96Q83 286 aaPredicted RBP5.32□□□□□ -1.56
PTPN20-208ENST00000395727 OR2M2Q96R28 347 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 SH3GL1Q99961 368 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 CACNG6Q9BXT2 260 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 CCDC134Q9H6E4 229 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 MSL2Q9HCI7 577 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 MYOZ1Q9NP98 299 aaPredicted RBP5.32□□□□□ -1.56
PTPN20-208ENST00000395727 TMEM160Q9NX00 188 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 SELENONQ9NZV5 590 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.32□□□□□ -1.56
PTPN20-208ENST00000395727 SLC13A4Q9UKG4 626 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 POU2F3Q9UKI9 436 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 OAZ3Q9UMX2 235 aa5.32□□□□□ -1.56
PTPN20-208ENST00000395727 A0A1W2PR80 420 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 TRAPPC13A5PLN9 417 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 HTR3EA5X5Y0 456 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 NPIPB13A6NJU9 1138 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 CENPBD1B2RD01 187 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 B9A039 149 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 NPIPB4C9JG80 1138 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 MS4A18H0YCH9 400 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 M0QX08 132 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 CD5LO43866 347 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 MGRN1O60291 552 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 NDUFS7O75251 213 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 ENTPD5O75356 428 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 CRLF1O75462 422 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 UPK3AO75631 287 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 KRT33AO76009 404 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 LYPD3O95274 346 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 CRYAAP02489 173 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 TSPAN19P0C672 248 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 CECR9P0C854 216 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 TROVE2P10155 538 aaKnown RBP eCLIP5.31□□□□□ -1.56
PTPN20-208ENST00000395727 THRBP10828 461 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 RBM34P42696 430 aaKnown RBP5.31□□□□□ -1.56
PTPN20-208ENST00000395727 PPOXP50336 477 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 FABP6P51161 128 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 EFNA4P52798 201 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 NUDT6P53370 316 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 CRYBA2P53672 197 aa5.31□□□□□ -1.56
PTPN20-208ENST00000395727 MTPNP58546 118 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms