RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 CYB561P49447 251 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 BLVRAP53004 296 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 SLC3A1Q07837 685 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 ETFDHQ16134 617 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 TMEM176BQ3YBM2 270 aaPredicted RBP13.39□□□□□ -0.27
CCT4-201ENST00000394440 RPL22L1Q6P5R6 122 aaKnown RBP13.39□□□□□ -0.27
CCT4-201ENST00000394440 OR6N2Q8NGY6 317 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 TXNDC15Q96J42 360 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 KLHL15Q96M94 604 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 TSPAN10Q9H1Z9 355 aaPredicted RBP13.39□□□□□ -0.27
CCT4-201ENST00000394440 KCNN2Q9H2S1 579 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 DEPPQ9NTK1 212 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 MRPL22Q9NWU5 206 aaKnown RBP13.39□□□□□ -0.27
CCT4-201ENST00000394440 DKKL1Q9UK85 242 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 CTDSP2O14595 271 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 PMS2P2O95744 297 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 CRABP1P29762 137 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 SRD5A2P31213 254 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 HNRNPA0Q13151 305 aaKnown RBP13.39□□□□□ -0.27
CCT4-201ENST00000394440 TUBA3EQ6PEY2 450 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 TMPPEQ6ZT21 453 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 DPY19L4Q7Z388 723 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 KCTD20Q7Z5Y7 419 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 ADAMTS14Q8WXS8 1223 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 GHSRQ92847 366 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 JSRP1Q96MG2 331 aaPredicted RBP13.39□□□□□ -0.27
CCT4-201ENST00000394440 KCNS3Q9BQ31 491 aa13.39□□□□□ -0.27
CCT4-201ENST00000394440 CRNNQ9UBG3 495 aaPredicted RBP13.39□□□□□ -0.27
CCT4-201ENST00000394440 MRM2Q9UI43 246 aaKnown RBP13.39□□□□□ -0.27
CCT4-201ENST00000394440 AQP7P3A6NL99 342 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 TAF4O00268 1085 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 TRAF3IP2O43734 574 aaPredicted RBP13.38□□□□□ -0.27
CCT4-201ENST00000394440 S100A5P33763 92 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 PTGS2P35354 604 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 OR2B6P58173 313 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 B3GALT5-AS1P59052 145 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 RAET1LQ5VY80 246 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 PLEKHG7Q6ZR37 379 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 CCDC190Q86UF4 302 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 MS4A15Q8N5U1 240 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 OTOSQ8NHW6 89 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 ABHD4Q8TB40 342 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 TMEM14AQ9Y6G1 99 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 LOC102725191A0A1B0GVB3 256 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 SEC14L5O43304 696 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 UPK3AO75631 287 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 CD40LGP29965 261 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 GDI2P50395 445 aaKnown RBP13.38□□□□□ -0.27
CCT4-201ENST00000394440 H3F3AP84243 136 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 C16orf87Q6PH81 154 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 IL22RA1Q8N6P7 574 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 MRPL13Q9BYD1 178 aaKnown RBP13.38□□□□□ -0.27
CCT4-201ENST00000394440 PPIL3Q9H2H8 161 aaKnown RBP13.38□□□□□ -0.27
CCT4-201ENST00000394440 STMN3Q9NZ72 180 aa13.38□□□□□ -0.27
CCT4-201ENST00000394440 SULT1C4O75897 302 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 PSMB10P40306 273 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 RPS27P42677 84 aaKnown RBP13.37□□□□□ -0.27
CCT4-201ENST00000394440 MTNR1BP49286 362 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 PPP5CP53041 499 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 RPS11P62280 158 aaKnown RBP eCLIP13.37□□□□□ -0.27
CCT4-201ENST00000394440 SLC35A1P78382 337 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 EGR3Q06889 387 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 AIMP2Q13155 320 aaKnown RBP13.37□□□□□ -0.27
CCT4-201ENST00000394440 DTNBP1Q96EV8 351 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 ADAD1Q96M93 576 aaKnown RBP13.37□□□□□ -0.27
CCT4-201ENST00000394440 WDFY2Q96P53 400 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 ASCL3Q9NQ33 180 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 TEKT2Q9UIF3 430 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 KCNG2Q9UJ96 466 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 LAMP5Q9UJQ1 280 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 CACNA1CQ13936 2221 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 IGKV1D-43A0A0B4J1Z2 117 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 SULT2B1O00204 365 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 PSMD9O00233 223 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 PHYHO14832 338 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 CASKO14936 926 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 RAMP1O60894 148 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 NEURL1O76050 574 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 OR8G3PP0DMU2 310 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 CSRP1P21291 193 aaKnown RBP13.37□□□□□ -0.27
CCT4-201ENST00000394440 BIDP55957 195 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 NANOS3P60323 173 aaKnown RBP13.37□□□□□ -0.27
CCT4-201ENST00000394440 RAC1P63000 192 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 ZNF45Q02386 682 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 FMODQ06828 376 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 UEVLDQ8IX04 471 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 HAVCR2Q8TDQ0 301 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 AMELYQ99218 206 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 PIGQQ9BRB3 760 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 LRFN1Q9P244 771 aa13.37□□□□□ -0.27
CCT4-201ENST00000394440 COA3Q9Y2R0 106 aaPredicted RBP13.37□□□□□ -0.27
CCT4-201ENST00000394440 CNOT1A5YKK6 2376 aaKnown RBP13.36□□□□□ -0.27
CCT4-201ENST00000394440 SLC35F4A4IF30 521 aa13.36□□□□□ -0.27
CCT4-201ENST00000394440 KLK2P20151 261 aa13.36□□□□□ -0.27
CCT4-201ENST00000394440 EDNRAP25101 427 aa13.36□□□□□ -0.27
CCT4-201ENST00000394440 CD96P40200 585 aa13.36□□□□□ -0.27
CCT4-201ENST00000394440 IFITM3Q01628 133 aa13.36□□□□□ -0.27
CCT4-201ENST00000394440 GLO1Q04760 184 aa13.36□□□□□ -0.27
CCT4-201ENST00000394440 FOXO1Q12778 655 aa13.36□□□□□ -0.27
CCT4-201ENST00000394440 RSPO4Q2I0M5 234 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms