RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 RGPD5Q99666 1765 aa13.67□□□□□ -0.22
CCDC50-201ENST00000392455 MDC1Q14676 2089 aaKnown RBP13.66□□□□□ -0.22
CCDC50-201ENST00000392455 CASP3P42574 277 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 VASPP50552 380 aaPredicted RBP13.66□□□□□ -0.22
CCDC50-201ENST00000392455 HIST1H3AP68431 136 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 REEP5Q00765 189 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 SSBP1Q04837 148 aaKnown RBP13.66□□□□□ -0.22
CCDC50-201ENST00000392455 FCRLBQ6BAA4 426 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 CDHR3Q6ZTQ4 885 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 ZNF765Q7L2R6 523 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 COMMD1Q8N668 190 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 PLK3Q9H4B4 646 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 IL23AQ9NPF7 189 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 MRPL22Q9NWU5 206 aaKnown RBP13.66□□□□□ -0.22
CCDC50-201ENST00000392455 TMEM59LQ9UK28 342 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 IER3IP1Q9Y5U9 82 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 NR0B2Q15466 257 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 COMMD6Q7Z4G1 85 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 WDR76Q9H967 626 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 ZNF840PA6NDX5 716 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 TDRD6O60522 2096 aaKnown RBP13.66□□□□□ -0.22
CCDC50-201ENST00000392455 NTF3P20783 257 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 MAOBP27338 520 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 TCTEX1D1Q8N7M0 179 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 DCAF13Q9NV06 445 aaKnown RBP13.66□□□□□ -0.22
CCDC50-201ENST00000392455 RPS26P11Q5JNZ5 115 aaPredicted RBP13.66□□□□□ -0.22
CCDC50-201ENST00000392455 VWA1Q6PCB0 445 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 OR2A1Q8NGT9 310 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 M0QZK8 103 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 GGCTO75223 188 aaKnown RBP13.66□□□□□ -0.22
CCDC50-201ENST00000392455 FCGR2AP12318 317 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 TMEM11P17152 192 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 CR2P20023 1033 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 COX5AP20674 150 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 DRD1P21728 446 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 NOVA1P51513 510 aaKnown RBP13.66□□□□□ -0.22
CCDC50-201ENST00000392455 BTG1P62324 171 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 ETFRF1Q6IPR1 90 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 PINX1Q96BK5 328 aaKnown RBP13.66□□□□□ -0.22
CCDC50-201ENST00000392455 CACNA1SQ13698 1873 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 K7ERQ8 282 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 ST8SIA3O43173 380 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 SEMA4FO95754 770 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 S100A4P26447 101 aaKnown RBP13.66□□□□□ -0.22
CCDC50-201ENST00000392455 NTSR1P30989 418 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 HMGCLP35914 325 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 KCNJ3P48549 501 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 PGGT1BP53609 377 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 SLC9A3R2Q15599 337 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 FIGLAQ6QHK4 219 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 ZNF595Q8IYB9 648 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 HLA-CQ95604 372 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 RNF186Q9NXI6 227 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 A0A0B4J2A0 478 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 HSPB2A8KAH6 182 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 AP1G1O43747 822 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 ATXN1LP0C7T5 689 aaKnown RBP13.66□□□□□ -0.22
CCDC50-201ENST00000392455 HSPB2Q16082 182 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 C18orf21Q32NC0 220 aaPredicted RBP13.66□□□□□ -0.22
CCDC50-201ENST00000392455 ZMYND19Q96E35 227 aaPredicted RBP13.66□□□□□ -0.22
CCDC50-201ENST00000392455 TPSD1Q9BZJ3 242 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 MMP28Q9H239 520 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 NKX2-4Q9H2Z4 354 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 SHPKQ9UHJ6 478 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 CAMK2AQ9UQM7 478 aa13.66□□□□□ -0.22
CCDC50-201ENST00000392455 UMAD1C9J7I0 102 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 H3BML4 177 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 SLC35E2BP0CK96 405 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 TMEM178AQ8NBL3 297 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 OR2A14Q96R47 310 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 UBR2Q8IWV8 1755 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 ANKRD34CP0C6C1 535 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 ZNF296Q8WUU4 475 aaPredicted RBP13.65□□□□□ -0.22
CCDC50-201ENST00000392455 PLEKHA2Q9HB19 425 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 GPR52Q9Y2T5 361 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 SCN1AP35498 2009 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 RPS19P39019 145 aaKnown RBP13.65□□□□□ -0.22
CCDC50-201ENST00000392455 EPHA5P54756 1037 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 RPE65Q16518 533 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 DEFB110Q30KQ9 67 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 BET1LQ9NYM9 111 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 SDHBP21912 280 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 SPINT3P49223 89 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 PPP1CBP62140 327 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 DSC1Q08554 894 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 SLC17A9Q9BYT1 436 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 ZNF888P0CJ79 500 aaPredicted RBP13.65□□□□□ -0.22
CCDC50-201ENST00000392455 IL1RNP18510 177 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 SPCS3P61009 180 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 IL10RAQ13651 578 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 RUNX3Q13761 415 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 MFSD4AQ8N468 514 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 ZNF384Q8TF68 577 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 FER1L6-AS2Q96M78 137 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 OR51B6Q9H340 312 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 CHST11Q9NPF2 352 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 A6NL46 340 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 SLC35D3Q5M8T2 416 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 ZNF691Q5VV52 312 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 LYSMD4Q5XG99 296 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms