RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 COL13A1Q5TAT6 717 aaPredicted RBP14.92□□□□□ -0.02
SHANK1-204ENST00000391814 IL34Q6ZMJ4 242 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 OR10D4PQ8NGN7 298 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 LRFN5Q96NI6 719 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 PIGQQ9BRB3 760 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 VN1R3Q9BXE9 311 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 CDH20Q9HBT6 801 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 SUSD5O60279 629 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 CTRB1P17538 263 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 PTGER4P35408 488 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 MEOX2P50222 304 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 KRTDAPP60985 99 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 LTB4RQ15722 352 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 CTRB2Q6GPI1 263 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 LINC00346Q8IVM7 164 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 OR13C5Q8NGS8 318 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 ASB11Q8WXH4 323 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 OPALINQ96PE5 141 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 C11orf84Q9BUA3 381 aaPredicted RBP14.92□□□□□ -0.02
SHANK1-204ENST00000391814 GABARAPL3Q9BY60 117 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 OR51I2Q9H344 312 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 OR52A4PA6NMU1 304 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 OTX2P32243 289 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 MN1Q10571 1320 aaPredicted RBP14.92□□□□□ -0.02
SHANK1-204ENST00000391814 OR5M10Q6IEU7 315 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 OR8G2PQ6IF36 304 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 NPSR1Q6W5P4 371 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 TMEM179BQ7Z7N9 219 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 RBM45Q8IUH3 476 aaKnown RBP14.92□□□□□ -0.02
SHANK1-204ENST00000391814 SLC22A24Q8N4F4 322 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 LSMEM1Q8N8F7 131 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 OR51A2Q8NGJ7 313 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 TMEM18Q96B42 140 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 POM121Q96HA1 1249 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 ZNF251Q9BRH9 671 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 GDF2Q9UK05 429 aaPredicted RBP14.92□□□□□ -0.02
SHANK1-204ENST00000391814 TRAF3IP2O43734 574 aaPredicted RBP14.92□□□□□ -0.02
SHANK1-204ENST00000391814 CBX7O95931 251 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 GTF2H5Q6ZYL4 71 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 SCD5Q86SK9 330 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 OR4F5Q8NH21 305 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 OR4A16Q8NH70 328 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 OR4F4Q96R69 305 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 C16orf70Q9BSU1 422 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 BCL2L11O43521 198 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 SLC2A10O95528 541 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 CALCBP10092 127 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 POU3F1Q03052 451 aaPredicted RBP14.92□□□□□ -0.02
SHANK1-204ENST00000391814 CLLU1Q5K131 121 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 CNKSR3Q6P9H4 555 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 OR52E1Q8NGJ3 308 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 MAP3K3Q99759 626 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 SRRQ9GZT4 340 aa14.92□□□□□ -0.02
SHANK1-204ENST00000391814 AQP7O14520 342 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 MMP11P24347 488 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 HOXC8P31273 242 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 TMEM268Q5VZI3 342 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 TRNP1Q6NT89 227 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 USP53Q70EK8 1073 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 GCNT2Q8N0V5 402 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 NANOS1Q8WY41 292 aaKnown RBP14.91□□□□□ -0.02
SHANK1-204ENST00000391814 ZNF566Q969W8 418 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 RHNO1Q9BSD3 238 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 MYOTQ9UBF9 498 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 GPR171O14626 319 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 OR10J4P0C629 311 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 SLC2A1P11166 492 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 CPMP14384 443 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 DPP4P27487 766 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 SDHAP31040 664 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 SOX18P35713 384 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 H3F3AP84243 136 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 IKZF1Q13422 519 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 ERV3-1Q14264 604 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 TMEM184AQ6ZMB5 413 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 CMTM4Q8IZR5 234 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 GLTPD2A6NH11 291 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 SEC14L6B5MCN3 397 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 SMAD6O43541 496 aaKnown RBP14.91□□□□□ -0.02
SHANK1-204ENST00000391814 RGS11O94810 467 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 F2P00734 622 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 HNRNPA2B1P22626 353 aaKnown RBP14.91□□□□□ -0.02
SHANK1-204ENST00000391814 ARRB2P32121 409 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 CBARPQ8N350 705 aaPredicted RBP14.91□□□□□ -0.02
SHANK1-204ENST00000391814 SLC43A2Q8N370 569 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 CPXM2Q8N436 756 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 ZNF480Q8WV37 535 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 CUTCQ9NTM9 273 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 KLHL42Q9P2K6 505 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 SULT2B1O00204 365 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 SLC31A2O15432 143 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 EDN1P05305 212 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 CHRM4P08173 479 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 OR8U8P0C7N1 319 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 DUSP1P28562 367 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 CTSCP53634 463 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 ZNF90Q03938 601 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 MFSD4AQ8N468 514 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 B4GALT7Q9UBV7 327 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 RFPL4AA6NLU0 287 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms