RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 ZNF367Q7RTV3 350 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 ZBTB46Q86UZ6 589 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 CLVS1Q8IUQ0 354 aaPredicted RBP23.88■■□□□ 1.41
MSX1-201ENST00000382723 POMGNT2Q8NAT1 580 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 OR6X1Q8NH79 312 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 SLC25A44Q96H78 314 aaPredicted RBP23.88■■□□□ 1.41
MSX1-201ENST00000382723 LSM2Q9Y333 95 aaKnown RBP23.88■■□□□ 1.41
MSX1-201ENST00000382723 PCDHGB7Q9Y5F8 929 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 CEPT1Q9Y6K0 416 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 DAPL1A0PJW8 107 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 IGHG1P01857 330 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 TFP02787 698 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 CD79BP40259 229 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 FCRLAQ7L513 359 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 HDDC2Q7Z4H3 204 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 SF3B5Q9BWJ5 86 aaKnown RBP23.88■■□□□ 1.41
MSX1-201ENST00000382723 RBM38Q9H0Z9 239 aaKnown RBP23.88■■□□□ 1.41
MSX1-201ENST00000382723 LUZP4Q9P127 313 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 B3GNT3Q9Y2A9 372 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 CRABP1P29762 137 aa23.87■■□□□ 1.41
MSX1-201ENST00000382723 TTKP33981 857 aa23.87■■□□□ 1.41
MSX1-201ENST00000382723 ERI1Q8IV48 349 aaKnown RBP23.87■■□□□ 1.41
MSX1-201ENST00000382723 MRPL13Q9BYD1 178 aaKnown RBP23.87■■□□□ 1.41
MSX1-201ENST00000382723 IGLV1-36A0A0B4J1U3 117 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 IGHG3P01860 377 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 HLA-DQA2P01906 255 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 PGA4P0DJD7 388 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 PGA3P0DJD8 388 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 SPHARQ15513 63 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 PLEKHN1Q494U1 663 aaPredicted RBP23.86■■□□□ 1.41
MSX1-201ENST00000382723 OTPQ5XKR4 325 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 ABLIM2Q6H8Q1 611 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 SLC35F2Q8IXU6 374 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 NOXO1Q8NFA2 376 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 GATAD2BQ8WXI9 593 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 ZNF649Q9BS31 505 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 JAM3Q9BX67 310 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 CAMK2AQ9UQM7 478 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 COA3Q9Y2R0 106 aaPredicted RBP23.86■■□□□ 1.41
MSX1-201ENST00000382723 ANKRD11Q6UB99 2663 aaPredicted RBP23.86■■□□□ 1.41
MSX1-201ENST00000382723 IGKV1D-43A0A0B4J1Z2 117 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 SYNGR4O95473 234 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 UNQ6494/PRO21346Q6UXR6 183 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.86■■□□□ 1.41
MSX1-201ENST00000382723 ZIC4Q8N9L1 334 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 ABHD3Q8WU67 409 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 NSMAFQ92636 917 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 WDYHV1Q96HA8 205 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 ADAD1Q96M93 576 aaKnown RBP23.86■■□□□ 1.41
MSX1-201ENST00000382723 COG8Q96MW5 612 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 RBP7Q96R05 134 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 MGLLQ99685 303 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 TTTY10Q9BZA0 68 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 LHX6Q9UPM6 363 aa23.86■■□□□ 1.41
MSX1-201ENST00000382723 ALPK2Q86TB3 2170 aa23.85■■□□□ 1.41
MSX1-201ENST00000382723 A0A1W2PQL4 384 aaPredicted RBP23.85■■□□□ 1.41
MSX1-201ENST00000382723 TMEM129A0AVI4 362 aa23.85■■□□□ 1.41
MSX1-201ENST00000382723 ZNF716A6NP11 495 aa23.85■■□□□ 1.41
MSX1-201ENST00000382723 RASGEF1BQ0VAM2 473 aa23.85■■□□□ 1.41
MSX1-201ENST00000382723 ARMCX4Q5H9R4 360 aa23.85■■□□□ 1.41
MSX1-201ENST00000382723 CHMP1BQ7LBR1 199 aa23.85■■□□□ 1.41
MSX1-201ENST00000382723 RFLNBQ8N5W9 214 aa23.85■■□□□ 1.41
MSX1-201ENST00000382723 ALG8Q9BVK2 526 aa23.85■■□□□ 1.41
MSX1-201ENST00000382723 ZNF71Q9NQZ8 489 aaPredicted RBP23.85■■□□□ 1.41
MSX1-201ENST00000382723 IGF2RP11717 2491 aa23.85■■□□□ 1.41
MSX1-201ENST00000382723 A0A087WV48 116 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 ZNHIT1O43257 154 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 AHCYL1O43865 530 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 CYTIPO60759 359 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 WNT4P56705 351 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 ACTC1P68032 377 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 ACTA1P68133 377 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 DNM1P34Q6PK57 102 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 KLHL36Q8N4N3 616 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 NAA50Q9GZZ1 169 aaKnown RBP23.84■■□□□ 1.41
MSX1-201ENST00000382723 RACGAP1Q9H0H5 632 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 WDR76Q9H967 626 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 PAQR5Q9NXK6 330 aaPredicted RBP23.84■■□□□ 1.41
MSX1-201ENST00000382723 MCTS1Q9ULC4 181 aaKnown RBP23.84■■□□□ 1.41
MSX1-201ENST00000382723 CPN1P15169 458 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 LIPAP38571 399 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 ZNF85Q03923 595 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 TIGD4Q8IY51 512 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 ZCCHC14Q8WYQ9 949 aaKnown RBP23.84■■□□□ 1.41
MSX1-201ENST00000382723 DGCR14Q96DF8 476 aaKnown RBP23.84■■□□□ 1.41
MSX1-201ENST00000382723 OR2M2Q96R28 347 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 PRRG4Q9BZD6 226 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 INPP5EQ9NRR6 644 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 FLVCR1Q9Y5Y0 555 aa23.84■■□□□ 1.41
MSX1-201ENST00000382723 OR2T7P0C7T2 308 aa23.83■■□□□ 1.41
MSX1-201ENST00000382723 GALEQ14376 348 aa23.83■■□□□ 1.41
MSX1-201ENST00000382723 THEM4Q5T1C6 240 aa23.83■■□□□ 1.41
MSX1-201ENST00000382723 SSX6Q7RTT6 188 aa23.83■■□□□ 1.41
MSX1-201ENST00000382723 SLC16A9Q7RTY1 509 aa23.83■■□□□ 1.41
MSX1-201ENST00000382723 SIAH3Q8IW03 269 aa23.83■■□□□ 1.41
MSX1-201ENST00000382723 OR2T27Q8NH04 317 aa23.83■■□□□ 1.41
MSX1-201ENST00000382723 FNDC9Q8TBE3 224 aa23.83■■□□□ 1.41
MSX1-201ENST00000382723 FUNDC2Q9BWH2 189 aa23.83■■□□□ 1.41
MSX1-201ENST00000382723 ISG20L2Q9H9L3 353 aaKnown RBP23.83■■□□□ 1.41
MSX1-201ENST00000382723 NCOR2Q9Y618 2525 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms