RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 TMEM53Q6P2H8 277 aa14.82□□□□□ -0.04
HMGN1-204ENST00000380749 HDDC2Q7Z4H3 204 aa14.82□□□□□ -0.04
HMGN1-204ENST00000380749 OR4D11Q8NGI4 311 aa14.82□□□□□ -0.04
HMGN1-204ENST00000380749 ZNF426Q9BUY5 554 aa14.82□□□□□ -0.04
HMGN1-204ENST00000380749 TAS2R5Q9NYW4 299 aa14.82□□□□□ -0.04
HMGN1-204ENST00000380749 TMEFF2Q9UIK5 374 aaPredicted RBP14.82□□□□□ -0.04
HMGN1-204ENST00000380749 FZR1Q9UM11 496 aa14.82□□□□□ -0.04
HMGN1-204ENST00000380749 TANC2Q9HCD6 1990 aa14.82□□□□□ -0.04
HMGN1-204ENST00000380749 MCIDASD6RGH6 385 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 LYNX1G3V0Z9 82 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 BCL10O95999 233 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 THY1P04216 161 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 ASAH2BP0C7U1 165 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 PGA4P0DJD7 388 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 PGA3P0DJD8 388 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 LYNX1P0DP58 116 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 ACHEP22303 614 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 CLRN1P58418 232 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 SELENOVP59797 346 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 MAD2L1BPQ15013 274 aaPredicted RBP14.81□□□□□ -0.04
HMGN1-204ENST00000380749 NKPD1Q17RQ9 610 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 VMACQ2NL98 169 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 SLC36A2Q495M3 483 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 ELFN2Q5R3F8 820 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 RGS7BPQ6MZT1 257 aaPredicted RBP14.81□□□□□ -0.04
HMGN1-204ENST00000380749 ZNF584Q8IVC4 421 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 LRRC17Q8N6Y2 441 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 SLC30A7Q8NEW0 376 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 NOXO1Q8NFA2 376 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 RDH5Q92781 318 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 RNF121Q9H920 327 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 CDH20Q9HBT6 801 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 DUSP13Q9UII6 198 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 GPR160Q9UJ42 338 aa14.81□□□□□ -0.04
HMGN1-204ENST00000380749 A0A0G2JND7 137 aa14.8□□□□□ -0.04
HMGN1-204ENST00000380749 A0A1W2PRG6 482 aa14.8□□□□□ -0.04
HMGN1-204ENST00000380749 HPXP02790 462 aa14.8□□□□□ -0.04
HMGN1-204ENST00000380749 PATE4P0C8F1 98 aa14.8□□□□□ -0.04
HMGN1-204ENST00000380749 SAGP10523 405 aaPredicted RBP14.8□□□□□ -0.04
HMGN1-204ENST00000380749 TCN1P20061 433 aaPredicted RBP14.8□□□□□ -0.04
HMGN1-204ENST00000380749 DAP3P51398 398 aaKnown RBP14.8□□□□□ -0.04
HMGN1-204ENST00000380749 ZNF84P51523 738 aa14.8□□□□□ -0.04
HMGN1-204ENST00000380749 DVL1P1P54792 670 aaPredicted RBP14.8□□□□□ -0.04
HMGN1-204ENST00000380749 NRN1LQ496H8 165 aa14.8□□□□□ -0.04
HMGN1-204ENST00000380749 SLC16A14Q7RTX9 510 aa14.8□□□□□ -0.04
HMGN1-204ENST00000380749 GLCCI1Q86VQ1 547 aa14.8□□□□□ -0.04
HMGN1-204ENST00000380749 LRP11Q86VZ4 500 aa14.8□□□□□ -0.04
HMGN1-204ENST00000380749 RFLNBQ8N5W9 214 aa14.8□□□□□ -0.04
HMGN1-204ENST00000380749 OR4K5Q8NGD3 323 aa14.8□□□□□ -0.04
HMGN1-204ENST00000380749 FGFBP3Q8TAT2 258 aa14.8□□□□□ -0.04
HMGN1-204ENST00000380749 SNX33Q8WV41 574 aa14.8□□□□□ -0.04
HMGN1-204ENST00000380749 C1orf159Q96HA4 380 aa14.8□□□□□ -0.04
HMGN1-204ENST00000380749 SH3GL1Q99961 368 aa14.8□□□□□ -0.04
HMGN1-204ENST00000380749 SH3GL3Q99963 347 aa14.8□□□□□ -0.04
HMGN1-204ENST00000380749 MRGBPQ9NV56 204 aa14.8□□□□□ -0.04
HMGN1-204ENST00000380749 MYEF2Q9P2K5 600 aaKnown RBP14.8□□□□□ -0.04
HMGN1-204ENST00000380749 BAG5Q9UL15 447 aa14.8□□□□□ -0.04
HMGN1-204ENST00000380749 TENM1Q9UKZ4 2725 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 CENPBD1B2RD01 187 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 B4DSR2 109 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 BLOC1S5-TXNDC5H3BN57 136 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 TCF21O43680 179 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 EDF1O60869 148 aaKnown RBP14.79□□□□□ -0.04
HMGN1-204ENST00000380749 PTHP01270 115 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 QDPRP09417 244 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 FAM157BP0CG42 384 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 SEC24CP53992 1094 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 TAS2R41P59536 307 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 SRSF2Q01130 221 aaKnown RBP14.79□□□□□ -0.04
HMGN1-204ENST00000380749 CYLC2Q14093 348 aaPredicted RBP14.79□□□□□ -0.04
HMGN1-204ENST00000380749 TBC1D28Q2M2D7 210 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 METTL21CQ5VZV1 264 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 LRFN4Q6PJG9 635 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 RINLQ6ZS11 566 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 CCDC80Q76M96 950 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 TSPYL5Q86VY4 417 aaPredicted RBP14.79□□□□□ -0.04
HMGN1-204ENST00000380749 CARM1Q86X55 608 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 ZNF416Q9BWM5 594 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 LRMDAQ9H2I8 198 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 STX18Q9P2W9 335 aaKnown RBP14.79□□□□□ -0.04
HMGN1-204ENST00000380749 SH3GLB1Q9Y371 365 aa14.79□□□□□ -0.04
HMGN1-204ENST00000380749 IQCMA0A1B0GVH7 501 aa14.78□□□□□ -0.04
HMGN1-204ENST00000380749 SNAP29O95721 258 aa14.78□□□□□ -0.04
HMGN1-204ENST00000380749 TFP02787 698 aa14.78□□□□□ -0.04
HMGN1-204ENST00000380749 MT-ND1P03886 318 aa14.78□□□□□ -0.04
HMGN1-204ENST00000380749 NAT2P11245 290 aa14.78□□□□□ -0.04
HMGN1-204ENST00000380749 RBM34P42696 430 aaKnown RBP14.78□□□□□ -0.04
HMGN1-204ENST00000380749 KLF3P57682 345 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-204ENST00000380749 MRPS11P82912 194 aaKnown RBP14.78□□□□□ -0.04
HMGN1-204ENST00000380749 PLP2Q04941 152 aa14.78□□□□□ -0.04
HMGN1-204ENST00000380749 RPL18Q07020 188 aaKnown RBP14.78□□□□□ -0.04
HMGN1-204ENST00000380749 DEF8Q6ZN54 512 aa14.78□□□□□ -0.04
HMGN1-204ENST00000380749 HDXQ7Z353 690 aa14.78□□□□□ -0.04
HMGN1-204ENST00000380749 RBM15BQ8NDT2 890 aaKnown RBP14.78□□□□□ -0.04
HMGN1-204ENST00000380749 OR1J2Q8NGS2 313 aa14.78□□□□□ -0.04
HMGN1-204ENST00000380749 ECSITQ9BQ95 431 aa14.78□□□□□ -0.04
HMGN1-204ENST00000380749 PRSS27Q9BQR3 290 aa14.78□□□□□ -0.04
HMGN1-204ENST00000380749 POLR2J2Q9GZM3 115 aaKnown RBP14.78□□□□□ -0.04
HMGN1-204ENST00000380749 POLR2J3Q9H1A7 115 aaKnown RBP14.78□□□□□ -0.04
HMGN1-204ENST00000380749 OR51B6Q9H340 312 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms