RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 A0A1W2PNV4 684 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 ZNF593O00488 134 aaPredicted RBP17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 TBX1O43435 398 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 ZIC3O60481 467 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 RAD1O60671 282 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 TGM1P22735 817 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 CRABP1P29762 137 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 BLVRAP53004 296 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 NANOS3P60323 173 aaKnown RBP17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 YIPF7Q8N8F6 280 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 KCNK17Q96T54 332 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 MIXL1Q9H2W2 232 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 MRPL22Q9NWU5 206 aaKnown RBP17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 TMEM14AQ9Y6G1 99 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 PRR33A8MZF0 331 aa17.78■□□□□ 0.44
PDLIM5-205ENST00000380180 UPK3AO75631 287 aa17.78■□□□□ 0.44
PDLIM5-205ENST00000380180 RPP14O95059 124 aaKnown RBP17.78■□□□□ 0.44
PDLIM5-205ENST00000380180 SERPINA3P01011 423 aa17.78■□□□□ 0.44
PDLIM5-205ENST00000380180 P04436 131 aa17.78■□□□□ 0.44
PDLIM5-205ENST00000380180 DNASE1L1P49184 302 aa17.78■□□□□ 0.44
PDLIM5-205ENST00000380180 P2RY4P51582 365 aa17.78■□□□□ 0.44
PDLIM5-205ENST00000380180 RPS11P62280 158 aaKnown RBP eCLIP17.78■□□□□ 0.44
PDLIM5-205ENST00000380180 LIPNQ5VXI9 398 aa17.78■□□□□ 0.44
PDLIM5-205ENST00000380180 NHLRC1Q6VVB1 395 aa17.78■□□□□ 0.44
PDLIM5-205ENST00000380180 NR2C2APQ86WQ0 139 aa17.78■□□□□ 0.44
PDLIM5-205ENST00000380180 OTOSQ8NHW6 89 aa17.78■□□□□ 0.44
PDLIM5-205ENST00000380180 TMEM41AQ96HV5 264 aa17.78■□□□□ 0.44
PDLIM5-205ENST00000380180 THOC3Q96J01 351 aaKnown RBP17.78■□□□□ 0.44
PDLIM5-205ENST00000380180 KCNG2Q9UJ96 466 aa17.78■□□□□ 0.44
PDLIM5-205ENST00000380180 COA3Q9Y2R0 106 aaPredicted RBP17.78■□□□□ 0.44
PDLIM5-205ENST00000380180 HDGFL3Q9Y3E1 203 aa17.78■□□□□ 0.44
PDLIM5-205ENST00000380180 CBR3O75828 277 aa17.77■□□□□ 0.44
PDLIM5-205ENST00000380180 ABHD16AO95870 558 aa17.77■□□□□ 0.44
PDLIM5-205ENST00000380180 KRT8P05787 483 aa17.77■□□□□ 0.44
PDLIM5-205ENST00000380180 ZMAT1Q5H9K5 638 aa17.77■□□□□ 0.44
PDLIM5-205ENST00000380180 FAM220AQ7Z4H9 259 aa17.77■□□□□ 0.44
PDLIM5-205ENST00000380180 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.77■□□□□ 0.44
PDLIM5-205ENST00000380180 EGFL6Q8IUX8 553 aa17.77■□□□□ 0.44
PDLIM5-205ENST00000380180 BEST3Q8N1M1 668 aa17.77■□□□□ 0.44
PDLIM5-205ENST00000380180 FAM83FQ8NEG4 500 aaPredicted RBP17.77■□□□□ 0.44
PDLIM5-205ENST00000380180 DEFB124Q8NES8 71 aa17.77■□□□□ 0.44
PDLIM5-205ENST00000380180 RPS4Y2Q8TD47 263 aa17.77■□□□□ 0.44
PDLIM5-205ENST00000380180 ATF6BQ99941 703 aa17.77■□□□□ 0.44
PDLIM5-205ENST00000380180 EMC6Q9BV81 110 aa17.77■□□□□ 0.44
PDLIM5-205ENST00000380180 DAPK2Q9UIK4 370 aa17.77■□□□□ 0.44
PDLIM5-205ENST00000380180 DKKL1Q9UK85 242 aa17.77■□□□□ 0.44
PDLIM5-205ENST00000380180 IKZF2Q9UKS7 526 aa17.77■□□□□ 0.44
PDLIM5-205ENST00000380180 ZNF814B7Z6K7 855 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 LOC110117498-PIK3R3F6TDL0 507 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 STMND1H3BQB6 276 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 BIDP55957 195 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 GLO1Q04760 184 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 FMODQ06828 376 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 EGR3Q06889 387 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 ZNF181Q2M3W8 571 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 DDI2Q5TDH0 399 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 STPG1Q5TH74 334 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 RAET1LQ5VY80 246 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 FAM205BPQ63HN1 556 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 LYSMD2Q8IV50 215 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 TEX19Q8NA77 164 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 ADPRHL1Q8NDY3 354 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 HSD17B8Q92506 261 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 PHF3Q92576 2039 aaKnown RBP17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 AMELYQ99218 206 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 SDHCQ99643 169 aaPredicted RBP17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 SACM1LQ9NTJ5 587 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 STMN3Q9NZ72 180 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 COMMD3Q9UBI1 195 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 TRAPPC4Q9Y296 219 aa17.77■□□□□ 0.43
PDLIM5-205ENST00000380180 A0A0G2JMM0 328 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 A0A1W2PPB8 328 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 A0A1W2PPK0 400 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 A0A1W2PRS3 328 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 OR2M5A3KFT3 312 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 KIR3DP1A8MWS1 328 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 SULT2B1O00204 365 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 MYL9P24844 172 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 TCF15Q12870 199 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 MEP1BQ16820 701 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 TMEM225Q6GV28 225 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 GPAT4Q86UL3 456 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 ZNF227Q86WZ6 799 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 RAB43Q86YS6 212 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 MIB2Q96AX9 1013 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 MROQ9BYG7 248 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 V9GYH0 126 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 PHYHO14832 338 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 GPRIN2O60269 458 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 LRP3O75074 770 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 MPZL1O95297 269 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 CYB561P49447 251 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 ADAM8P78325 824 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 PAMR1Q6UXH9 720 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 LRRC69Q6ZNQ3 347 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 TMPPEQ6ZT21 453 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 TPRA1Q86W33 373 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 UEVLDQ8IX04 471 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 ADAMTS17Q8TE56 1095 aa17.76■□□□□ 0.43
PDLIM5-205ENST00000380180 COX4I2Q96KJ9 171 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms