RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 ABHD4Q8TB40 342 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 ZNF501Q96CX3 271 aaPredicted RBP7.33□□□□□ -1.24
CKAP2-203ENST00000378037 DTNBP1Q96EV8 351 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 PDCD10Q9BUL8 212 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 MMP27Q9H306 513 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 BANF2Q9H503 90 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 ZNF701Q9NV72 531 aaPredicted RBP7.33□□□□□ -1.24
CKAP2-203ENST00000378037 LRFN1Q9P244 771 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 CHRNA9Q9UGM1 479 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 ADAM30Q9UKF2 790 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 B9D1Q9UPM9 204 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 DHDHQ9UQ10 334 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 RBM7Q9Y580 266 aaKnown RBP7.33□□□□□ -1.24
CKAP2-203ENST00000378037 A0A0B4J2E0 115 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 A0A1B0GX12 115 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 LILRA5A6NI73 299 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 DSCR3O14972 297 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 RER1O15258 196 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 PPM1BO75688 479 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 HTR3BO95264 441 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 MPIG6BO95866 241 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 RBMS1P29558 406 aaKnown RBP7.33□□□□□ -1.24
CKAP2-203ENST00000378037 GLO1Q04760 184 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 PUDPQ08623 228 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 SCRN3Q0VDG4 424 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 ZFP69Q49AA0 526 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 SPATA46Q5T0L3 261 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 HES3Q5TGS1 186 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 ZNF468Q5VIY5 522 aaPredicted RBP7.33□□□□□ -1.24
CKAP2-203ENST00000378037 NXNL2Q5VZ03 156 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 PMS2CLQ68D20 193 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 ARMC10Q8N2F6 343 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 NANOGP1Q8N7R0 232 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 CLEC1AQ8NC01 280 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 TRUB1Q8WWH5 349 aaKnown RBP7.33□□□□□ -1.24
CKAP2-203ENST00000378037 PIGTQ969N2 578 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 PGAM5Q96HS1 289 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 FCRL1Q96LA6 429 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 AMELYQ99218 206 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 MCCC2Q9HCC0 563 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 ZNF71Q9NQZ8 489 aaPredicted RBP7.33□□□□□ -1.24
CKAP2-203ENST00000378037 SLC22A11Q9NSA0 550 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 SATB2Q9UPW6 733 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 A0A1B0GTQ1 180 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 CIB4A0PJX0 185 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 TRABD2BA6NFA1 517 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 SCG5P05408 212 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 B4GALT1P15291 398 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 GIFP27352 417 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 BCAP31P51572 246 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 IFITM3Q01628 133 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 C4orf46Q504U0 113 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 ZNF613Q6PF04 617 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 SLC7A5P1Q8MH63 180 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 MEIOBQ8N635 442 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 KIAA1143Q96AT1 154 aaPredicted RBP7.33□□□□□ -1.24
CKAP2-203ENST00000378037 MIB2Q96AX9 1013 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 TWSG1Q9GZX9 223 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 CHMP1AQ9HD42 196 aaPredicted RBP7.33□□□□□ -1.24
CKAP2-203ENST00000378037 P4HTMQ9NXG6 502 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 SLCO1C1Q9NYB5 712 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 HRH3Q9Y5N1 445 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 USP9XQ93008 2570 aaPredicted RBP7.32□□□□□ -1.24
CKAP2-203ENST00000378037 D6RAR5 112 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 K7ESF4 209 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 RGS9O75916 674 aaPredicted RBP7.32□□□□□ -1.24
CKAP2-203ENST00000378037 OR7A10O76100 309 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 TFP02787 698 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 POU2F2P09086 479 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 TACSTD2P09758 323 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 IL7P13232 177 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 POU3F2P20265 443 aaPredicted RBP7.32□□□□□ -1.24
CKAP2-203ENST00000378037 TSFMP43897 325 aaKnown RBP7.32□□□□□ -1.24
CKAP2-203ENST00000378037 NOVA1P51513 510 aaKnown RBP7.32□□□□□ -1.24
CKAP2-203ENST00000378037 RIDAP52758 137 aaKnown RBP7.32□□□□□ -1.24
CKAP2-203ENST00000378037 MYBPHQ13203 477 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.32□□□□□ -1.24
CKAP2-203ENST00000378037 FAM69AQ5T7M9 428 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 KCTD9Q7L273 389 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 POGLUT1Q8NBL1 392 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 OR2AE1Q8NHA4 323 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 DYNC2LI1Q8TCX1 351 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 TM4SF19Q96DZ7 209 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 MRPL48Q96GC5 212 aaKnown RBP7.32□□□□□ -1.24
CKAP2-203ENST00000378037 C19orf43Q9BQ61 176 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 PRSS27Q9BQR3 290 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 AUNIPQ9H7T9 357 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 SP140LQ9H930 580 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 COQ3Q9NZJ6 369 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 MYOTQ9UBF9 498 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 ING4Q9UNL4 249 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 POLHQ9Y253 713 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 SYT7O43581 403 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 TLX3O43711 291 aaPredicted RBP7.32□□□□□ -1.24
CKAP2-203ENST00000378037 HTR1FP30939 366 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 ACAA2P42765 397 aaKnown RBP7.32□□□□□ -1.24
CKAP2-203ENST00000378037 PTH2RP49190 550 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 SSR4P51571 173 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 PPP5CP53041 499 aa7.32□□□□□ -1.24
CKAP2-203ENST00000378037 ARFIP1P53367 373 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms