RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 CD200R1LQ6Q8B3 271 aa11.27□□□□□ -0.61
CLCN6-206ENST00000376496 ASCL5Q7RTU5 278 aa11.27□□□□□ -0.61
CLCN6-206ENST00000376496 NEIL3Q8TAT5 605 aa11.27□□□□□ -0.61
CLCN6-206ENST00000376496 ZBTB8AQ96BR9 441 aa11.27□□□□□ -0.61
CLCN6-206ENST00000376496 INTS14Q96SY0 518 aa11.27□□□□□ -0.61
CLCN6-206ENST00000376496 CCDC59Q9P031 241 aaKnown RBP11.27□□□□□ -0.61
CLCN6-206ENST00000376496 MRM2Q9UI43 246 aaKnown RBP11.27□□□□□ -0.61
CLCN6-206ENST00000376496 PTPRBP23467 1997 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 CASKO14936 926 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 CBR3O75828 277 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 NEURL1O76050 574 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 HLA-DPB1P04440 258 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 CELA3AP09093 270 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 CALRP27797 417 aaKnown RBP11.26□□□□□ -0.61
CLCN6-206ENST00000376496 EIF1P41567 113 aaKnown RBP11.26□□□□□ -0.61
CLCN6-206ENST00000376496 PLXDC2Q6UX71 529 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 GDPGP1Q6ZNW5 385 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 CDC20BQ86Y33 519 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 SCAIQ8N9R8 606 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 NTNG2Q96CW9 530 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 MMP27Q9H306 513 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 ASCL3Q9NQ33 180 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 LAMP5Q9UJQ1 280 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 MOKQ9UQ07 419 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 DCHS1Q96JQ0 3298 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 A0A0J9YW62 118 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 ENPP1P22413 925 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 SOX6P35712 828 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 SIRPAP78324 504 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 DMKNQ6E0U4 476 aaPredicted RBP11.26□□□□□ -0.61
CLCN6-206ENST00000376496 TMEM81Q6P7N7 255 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 TUBA3EQ6PEY2 450 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 LRRN1Q6UXK5 716 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 CEACAM19Q7Z692 300 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 NR2C2APQ86WQ0 139 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 DTX1Q86Y01 620 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 LINC00346Q8IVM7 164 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 YIPF7Q8N8F6 280 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 ABHD4Q8TB40 342 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 RNF166Q96A37 237 aaPredicted RBP11.26□□□□□ -0.61
CLCN6-206ENST00000376496 VSX1Q9NZR4 365 aaPredicted RBP11.26□□□□□ -0.61
CLCN6-206ENST00000376496 B3GALT5Q9Y2C3 310 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 PCDHGB7Q9Y5F8 929 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 ZNF407Q9C0G0 2248 aa11.26□□□□□ -0.61
CLCN6-206ENST00000376496 TRBV2A0A0J9YWF9 115 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 DOK2O60496 412 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 RGS9O75916 674 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-206ENST00000376496 SNX4O95219 450 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 IGHMP01871 453 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 GDF1P27539 372 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 GDI2P50395 445 aaKnown RBP11.25□□□□□ -0.61
CLCN6-206ENST00000376496 ADAM8P78325 824 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 IFITM3Q01628 133 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 ZP4Q12836 540 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 MFAP5Q13361 173 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 MFSD13AQ14CX5 517 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 CORO6Q6QEF8 472 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 TMPPEQ6ZT21 453 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 PXKQ7Z7A4 578 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 UEVLDQ8IX04 471 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 GPALPP1Q8IXQ4 340 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 BORCS5Q969J3 196 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 TMEM41AQ96HV5 264 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 NXF2Q9GZY0 626 aaKnown RBP11.25□□□□□ -0.61
CLCN6-206ENST00000376496 SLCO1C1Q9NYB5 712 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 FAM166BA8MTA8 275 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 CDRT15L2A8MXV6 281 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 PLPP2O43688 288 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 CD97P48960 835 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 RORCP51449 518 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 GBX2P52951 348 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-206ENST00000376496 B3GALT5-AS1P59052 145 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 CDK5R1Q15078 307 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 OR1C1Q15619 314 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 LIPNQ5VXI9 398 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 TMPRSS12Q86WS5 348 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 LAX1Q8IWV1 398 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 CLEC1AQ8NC01 280 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 FAM83FQ8NEG4 500 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-206ENST00000376496 OR6S1Q8NH40 331 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 PPP1R14AQ96A00 147 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 SLC25A46Q96AG3 418 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 KCNK17Q96T54 332 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 SRXN1Q9BYN0 137 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 SMURF1Q9HCE7 757 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 PLEKHB1Q9UF11 243 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-206ENST00000376496 GSTK1Q9Y2Q3 226 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 FKBP7Q9Y680 259 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 ANKRD33BA6NCL7 494 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 TRAF3IP2O43734 574 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-206ENST00000376496 ALOX5APP20292 161 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 ADH6P28332 368 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 FGF9P31371 208 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-206ENST00000376496 OR10A3P58181 314 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 ACTA2P62736 377 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 ACTG2P63267 376 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 BDH1Q02338 343 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 ZNF684Q5T5D7 378 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 NHLRC1Q6VVB1 395 aa11.25□□□□□ -0.61
CLCN6-206ENST00000376496 RDH10Q8IZV5 341 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms