RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 STSP08842 583 aa20.29■□□□□ 0.84
HLA-C-202ENST00000376237 TMIGD3P0DMS9 266 aaPredicted RBP20.29■□□□□ 0.84
HLA-C-202ENST00000376237 CENPAP49450 140 aa20.29■□□□□ 0.84
HLA-C-202ENST00000376237 TMED1Q13445 227 aa20.29■□□□□ 0.84
HLA-C-202ENST00000376237 SLC35D3Q5M8T2 416 aa20.29■□□□□ 0.84
HLA-C-202ENST00000376237 C6orf141Q5SZD1 244 aa20.29■□□□□ 0.84
HLA-C-202ENST00000376237 NUFIP2Q7Z417 695 aaKnown RBP20.29■□□□□ 0.84
HLA-C-202ENST00000376237 ZBTB46Q86UZ6 589 aa20.29■□□□□ 0.84
HLA-C-202ENST00000376237 ZNF100Q8IYN0 542 aa20.29■□□□□ 0.84
HLA-C-202ENST00000376237 RPRMLQ8N4K4 120 aa20.29■□□□□ 0.84
HLA-C-202ENST00000376237 NMD3Q96D46 503 aaKnown RBP20.29■□□□□ 0.84
HLA-C-202ENST00000376237 ZNF582Q96NG8 517 aaPredicted RBP20.29■□□□□ 0.84
HLA-C-202ENST00000376237 NUAK2Q9H093 628 aa20.29■□□□□ 0.84
HLA-C-202ENST00000376237 SLCO5A1Q9H2Y9 848 aa20.29■□□□□ 0.84
HLA-C-202ENST00000376237 UBAP1Q9NZ09 502 aa20.29■□□□□ 0.84
HLA-C-202ENST00000376237 SPENQ96T58 3664 aaKnown RBP20.29■□□□□ 0.84
HLA-C-202ENST00000376237 SLC22A31A6NKX4 558 aa20.28■□□□□ 0.84
HLA-C-202ENST00000376237 ENTPD6O75354 484 aa20.28■□□□□ 0.84
HLA-C-202ENST00000376237 SPI1P17947 270 aa20.28■□□□□ 0.84
HLA-C-202ENST00000376237 KIR2DL2P43627 348 aaPredicted RBP20.28■□□□□ 0.84
HLA-C-202ENST00000376237 ZNF133P52736 654 aaPredicted RBP20.28■□□□□ 0.84
HLA-C-202ENST00000376237 OR6V1Q8N148 313 aa20.28■□□□□ 0.84
HLA-C-202ENST00000376237 GPR137CQ8N3F9 429 aa20.28■□□□□ 0.84
HLA-C-202ENST00000376237 OR9Q1Q8NGQ5 310 aa20.28■□□□□ 0.84
HLA-C-202ENST00000376237 MCHR2Q969V1 340 aa20.28■□□□□ 0.84
HLA-C-202ENST00000376237 HCAR1Q9BXC0 346 aa20.28■□□□□ 0.84
HLA-C-202ENST00000376237 RACGAP1Q9H0H5 632 aa20.28■□□□□ 0.84
HLA-C-202ENST00000376237 OR51V1Q9H2C8 321 aa20.28■□□□□ 0.84
HLA-C-202ENST00000376237 MED20Q9H944 212 aa20.28■□□□□ 0.84
HLA-C-202ENST00000376237 SRA1Q9HD15 236 aaKnown RBP20.28■□□□□ 0.84
HLA-C-202ENST00000376237 DNAJC27Q9NZQ0 273 aa20.28■□□□□ 0.84
HLA-C-202ENST00000376237 AASSQ9UDR5 926 aa20.28■□□□□ 0.84
HLA-C-202ENST00000376237 SH3BGRL2Q9UJC5 107 aa20.28■□□□□ 0.84
HLA-C-202ENST00000376237 B9D1Q9UPM9 204 aa20.28■□□□□ 0.84
HLA-C-202ENST00000376237 OSGIN2Q9Y236 505 aa20.28■□□□□ 0.84
HLA-C-202ENST00000376237 SHANK1Q9Y566 2161 aa20.28■□□□□ 0.84
HLA-C-202ENST00000376237 HSPB2A8KAH6 182 aa20.27■□□□□ 0.84
HLA-C-202ENST00000376237 SLC16A7O60669 478 aa20.27■□□□□ 0.84
HLA-C-202ENST00000376237 QDPRP09417 244 aa20.27■□□□□ 0.84
HLA-C-202ENST00000376237 HTR1FP30939 366 aa20.27■□□□□ 0.84
HLA-C-202ENST00000376237 OR3A2P47893 321 aa20.27■□□□□ 0.84
HLA-C-202ENST00000376237 BLVRAP53004 296 aa20.27■□□□□ 0.84
HLA-C-202ENST00000376237 CDH11P55287 796 aa20.27■□□□□ 0.84
HLA-C-202ENST00000376237 TLE1Q04724 770 aa20.27■□□□□ 0.84
HLA-C-202ENST00000376237 PMPCAQ10713 525 aa20.27■□□□□ 0.84
HLA-C-202ENST00000376237 HSPB2Q16082 182 aa20.27■□□□□ 0.84
HLA-C-202ENST00000376237 MEPCEQ7L2J0 689 aaKnown RBP20.27■□□□□ 0.84
HLA-C-202ENST00000376237 CNEP1R1Q8N9A8 125 aa20.27■□□□□ 0.84
HLA-C-202ENST00000376237 SFXN3Q9BWM7 321 aa20.27■□□□□ 0.84
HLA-C-202ENST00000376237 ULBP2Q9BZM5 246 aa20.27■□□□□ 0.84
HLA-C-202ENST00000376237 PLCXD1Q9NUJ7 323 aa20.27■□□□□ 0.84
HLA-C-202ENST00000376237 MEMO1Q9Y316 297 aa20.27■□□□□ 0.84
HLA-C-202ENST00000376237 KHDRBS3O75525 346 aaKnown RBP20.27■□□□□ 0.83
HLA-C-202ENST00000376237 KRT33AO76009 404 aa20.27■□□□□ 0.83
HLA-C-202ENST00000376237 CNOT4O95628 575 aaKnown RBP20.27■□□□□ 0.83
HLA-C-202ENST00000376237 SLC2A5P22732 501 aa20.27■□□□□ 0.83
HLA-C-202ENST00000376237 CTSSP25774 331 aa20.27■□□□□ 0.83
HLA-C-202ENST00000376237 SIRPAP78324 504 aa20.27■□□□□ 0.83
HLA-C-202ENST00000376237 APOFQ13790 326 aa20.27■□□□□ 0.83
HLA-C-202ENST00000376237 KLHL12Q53G59 568 aa20.27■□□□□ 0.83
HLA-C-202ENST00000376237 TSPO2Q5TGU0 170 aa20.27■□□□□ 0.83
HLA-C-202ENST00000376237 LRFN4Q6PJG9 635 aa20.27■□□□□ 0.83
HLA-C-202ENST00000376237 ABHD12BQ7Z5M8 362 aaPredicted RBP20.27■□□□□ 0.83
HLA-C-202ENST00000376237 BCDIN3DQ7Z5W3 292 aaKnown RBP20.27■□□□□ 0.83
HLA-C-202ENST00000376237 BBS1Q8NFJ9 593 aa20.27■□□□□ 0.83
HLA-C-202ENST00000376237 TSSK2Q96PF2 358 aa20.27■□□□□ 0.83
HLA-C-202ENST00000376237 DMRTA2Q96SC8 542 aa20.27■□□□□ 0.83
HLA-C-202ENST00000376237 TEAD3Q99594 435 aa20.27■□□□□ 0.83
HLA-C-202ENST00000376237 YTHDF1Q9BYJ9 559 aaKnown RBP20.27■□□□□ 0.83
HLA-C-202ENST00000376237 PLSCR4Q9NRQ2 329 aa20.27■□□□□ 0.83
HLA-C-202ENST00000376237 WARS2Q9UGM6 360 aaKnown RBP20.27■□□□□ 0.83
HLA-C-202ENST00000376237 RPL36Q9Y3U8 105 aaKnown RBP20.27■□□□□ 0.83
HLA-C-202ENST00000376237 DCTN6O00399 190 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 TNFSF13O75888 250 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 GLCEO94923 617 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 IL18BPO95998 194 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 CCDC159P0C7I6 412 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 CLUP10909 449 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 CTLA4P16410 223 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 GLO1Q04760 184 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 FOXF2Q12947 444 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 STK11Q15831 433 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 C10orf128Q5T292 105 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 LCN1P1Q5VSP4 162 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 LAIR2Q6ISS4 152 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 SLC25A47Q6Q0C1 308 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 PROKR2Q8NFJ6 384 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 RERGLQ9H628 205 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 C12orf49Q9H741 205 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 HAO2Q9NYQ3 351 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 UPB1Q9UBR1 384 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 ZNF629Q9UEG4 869 aaPredicted RBP20.26■□□□□ 0.83
HLA-C-202ENST00000376237 ZGRF1Q86YA3 2104 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 COL6A6A6NMZ7 2263 aa20.26■□□□□ 0.83
HLA-C-202ENST00000376237 IGLV1-36A0A0B4J1U3 117 aa20.25■□□□□ 0.83
HLA-C-202ENST00000376237 UPK3AO75631 287 aa20.25■□□□□ 0.83
HLA-C-202ENST00000376237 GYPBP06028 91 aa20.25■□□□□ 0.83
HLA-C-202ENST00000376237 FMO3P31513 532 aa20.25■□□□□ 0.83
HLA-C-202ENST00000376237 OPRM1P35372 400 aa20.25■□□□□ 0.83
HLA-C-202ENST00000376237 RPS7P62081 194 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms