RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 GRINAQ7Z429 371 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 EXD3Q8N9H8 876 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 TMEM229BQ8NBD8 167 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 ST6GALNAC5Q9BVH7 336 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 RAB18Q9NP72 206 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 SLC2A9Q9NRM0 540 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 CTSOP43234 321 aaPredicted RBP9.4□□□□□ -0.9
PTCH1-204ENST00000375290 PITX1P78337 314 aaPredicted RBP9.4□□□□□ -0.9
PTCH1-204ENST00000375290 GALNT10Q86SR1 603 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 CALHM3Q86XJ0 350 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF75AQ96N20 296 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 SUCNR1Q9BXA5 334 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 A0A0B4J2A0 478 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 TMEM88BA6NKF7 163 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 PLPP2O43688 288 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 GSTZ1O43708 216 aaPredicted RBP9.4□□□□□ -0.91
PTCH1-204ENST00000375290 ZNF354AO60765 605 aaPredicted RBP9.4□□□□□ -0.91
PTCH1-204ENST00000375290 NSA2O95478 260 aaKnown RBP9.4□□□□□ -0.91
PTCH1-204ENST00000375290 GDF7Q7Z4P5 450 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 BAGE3Q86Y29 109 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 BAGE2Q86Y30 109 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 TVP23CQ96ET8 276 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 OR1F2PQ96R84 312 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 EDEM2Q9BV94 578 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 CHST6Q9GZX3 395 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 SHPKQ9UHJ6 478 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 NUP205Q92621 2012 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 GFYI3L273 518 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 TRHRP34981 398 aaPredicted RBP9.4□□□□□ -0.91
PTCH1-204ENST00000375290 COTL1Q14019 142 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 MOGAT2Q3SYC2 334 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 MFSD12Q6NUT3 480 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 FGGYQ96C11 551 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 SIRT7Q9NRC8 400 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 SLC23A1Q9UHI7 598 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 B3GALT1Q9Y5Z6 326 aa9.4□□□□□ -0.91
PTCH1-204ENST00000375290 SERINC4A6NH21 518 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 FAM183AA6NL82 134 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 TMEM183BQ1AE95 376 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 NPSR1Q6W5P4 371 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 HDAC8Q9BY41 377 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 NINQ8N4C6 2090 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 B4DGG1 531 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 P04436 131 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 ACSM4P0C7M7 580 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 RAB35Q15286 201 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 ZNF280BQ86YH2 543 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 APEHP13798 732 aaKnown RBP9.39□□□□□ -0.91
PTCH1-204ENST00000375290 MMP11P24347 488 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 CST5P28325 142 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-204ENST00000375290 AQP6Q13520 282 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 CYB561A3Q8NBI2 242 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 HRASLSQ9HDD0 168 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 FXYD1O00168 92 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 CYTIPO60759 359 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 SUB1P53999 127 aaKnown RBP eCLIP9.39□□□□□ -0.91
PTCH1-204ENST00000375290 TAS2R45P59539 299 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 DEFB115Q30KQ5 88 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 ZNF100Q8IYN0 542 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 SCLYQ96I15 445 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 MSLNLQ96KJ4 702 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 ATF6BQ99941 703 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 MCTS1Q9ULC4 181 aaKnown RBP9.39□□□□□ -0.91
PTCH1-204ENST00000375290 PADI1Q9ULC6 663 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 CFAP20Q9Y6A4 193 aaKnown RBP9.39□□□□□ -0.91
PTCH1-204ENST00000375290 KDM4EB2RXH2 506 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-204ENST00000375290 DPTQ07507 201 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 C17orf67Q0P5P2 114 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 C11orf87Q6NUJ2 197 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 OR4N5Q8IXE1 308 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 GJC3Q8NFK1 279 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 HGDQ93099 445 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 SIRT5Q9NXA8 310 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 GNG13Q9P2W3 67 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 MIA3Q5JRA6 1907 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 SLC16A7O60669 478 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 TNFSF4P23510 183 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 DVL3Q92997 716 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-204ENST00000375290 IGFLR1Q9H665 355 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 DVL1O14640 695 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 PIP5K1CO60331 668 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 CD37P11049 281 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 TNFRSF1BP20333 461 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 APLNRP35414 380 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 AFMIDQ63HM1 303 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 SLC25A18Q9H1K4 315 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 PLEK2Q9NYT0 353 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 NDUFB6O95139 128 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 CDK5Q00535 292 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 HHEXQ03014 270 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 STK11Q15831 433 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 SPATC1Q76KD6 591 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 TUBB1Q9H4B7 451 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 SCN9AQ15858 1988 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 OR4E1P0C645 316 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 HNRNPA2B1P22626 353 aaKnown RBP9.39□□□□□ -0.91
PTCH1-204ENST00000375290 SDHAP31040 664 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 OR1D4P47884 311 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 SUMO1P63165 101 aaKnown RBP9.39□□□□□ -0.91
PTCH1-204ENST00000375290 RTL8BQ17RB0 113 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms