RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 CITO14578 2027 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 CHRM4P08173 479 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 APLNRP35414 380 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 SNTB1Q13884 538 aaKnown RBP19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 PRSS36Q5K4E3 855 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 YIPF5Q969M3 257 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 SCN7AQ01118 1682 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 PRAMEF27A3QJZ7 478 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 EIF4EP06730 217 aaKnown RBP19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 ZBTB37Q5TC79 503 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 PRAMEF9Q5VWM5 478 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 SEMA6CQ9H3T2 930 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 ADAM18Q9Y3Q7 739 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 FCGR2AP12318 317 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 RTN4RL1Q86UN2 441 aaPredicted RBP19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 MSRB3Q8IXL7 192 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 FRZBQ92765 325 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 SGK3Q96BR1 496 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 OR6C6A6NF89 314 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 RAB4BP61018 213 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 C17orf67Q0P5P2 114 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 PMPCAQ10713 525 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 ZNF133P52736 654 aaPredicted RBP19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 SLC35A1P78382 337 aa19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 H3F3CQ6NXT2 135 aa19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 TP53TG5Q9Y2B4 290 aa19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 P2RY10O00398 339 aa19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 TNFRSF10CO14798 259 aa19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 MTCP1P56278 107 aa19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 PXDC1Q5TGL8 231 aa19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 ST7LQ8TDW4 575 aa19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 NXF5Q9H1B4 397 aaKnown RBP19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 FTSJ1Q9UET6 329 aa19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 KIAA1551Q9HCM1 1747 aa19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 TRAPPC2LH3BP13 241 aa19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 TBX19O60806 448 aa19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 RPL27P61353 136 aaKnown RBP19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 OR10K2Q6IF99 312 aa19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 GABRG1Q8N1C3 465 aa19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 PLEKHM1Q9Y4G2 1056 aa19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 SPNP16150 400 aa19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 MMP15P51511 669 aa19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 SPNS1Q9H2V7 528 aa19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 PUS1Q9Y606 427 aaKnown RBP eCLIP19.46■□□□□ 0.71
TGFBR1-202ENST00000374994 DOC2BQ14184 412 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 TMEFF1Q8IYR6 380 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 OR10R2Q8NGX6 335 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 TOE1Q96GM8 510 aaKnown RBP19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 TPSD1Q9BZJ3 242 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 HCFC2Q9Y5Z7 792 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 SCGB2A1O75556 95 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 CD79BP40259 229 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 RPS18P62269 152 aaKnown RBP19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 CLLU1Q5K131 121 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 NPSR1Q6W5P4 371 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 KIAA0907Q7Z7F0 614 aaPredicted RBP19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 CPNE4Q96A23 557 aaPredicted RBP19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 LOXHD1Q8IVV2 1947 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 PRICKLE3O43900 615 aaPredicted RBP19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 RPS2P15880 293 aaKnown RBP19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 TBPP20226 339 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 RAG2P55895 527 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 MFAP5Q13361 173 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 PLPP7Q8NBV4 271 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 OR5L1Q8NGL2 311 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 LINC00615Q96LM1 132 aaPredicted RBP19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 TAS2R5Q9NYW4 299 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 ZNF225Q9UK10 706 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 FBXL4Q9UKA2 621 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 RPH3AQ9Y2J0 694 aaPredicted RBP19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 B4GALT3O60512 393 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 DBHP09172 617 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 ZP2Q05996 745 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 HIST2H3AQ71DI3 136 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 C10orf90Q96M02 699 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 ETHE1O95571 254 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 MAOBP27338 520 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 LGI3Q8N145 548 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 FAM213BQ8TBF2 198 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 UPRTQ96BW1 309 aa19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 MCTS1Q9ULC4 181 aaKnown RBP19.45■□□□□ 0.7
TGFBR1-202ENST00000374994 SLC36A2Q495M3 483 aa19.44■□□□□ 0.7
TGFBR1-202ENST00000374994 CMTM4Q8IZR5 234 aa19.44■□□□□ 0.7
TGFBR1-202ENST00000374994 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.44■□□□□ 0.76e-6■■■■□ 22.2
TGFBR1-202ENST00000374994 CYSLTR2Q9NS75 346 aa19.44■□□□□ 0.7
TGFBR1-202ENST00000374994 ERV3-1Q14264 604 aa19.44■□□□□ 0.7
TGFBR1-202ENST00000374994 MOB3CQ70IA8 216 aa19.44■□□□□ 0.7
TGFBR1-202ENST00000374994 A0A087WV62 115 aa19.44■□□□□ 0.7
TGFBR1-202ENST00000374994 TRBV11-1A0A0K0K1C0 115 aa19.44■□□□□ 0.7
TGFBR1-202ENST00000374994 HBG1P69891 147 aa19.44■□□□□ 0.7
TGFBR1-202ENST00000374994 HBG2P69892 147 aa19.44■□□□□ 0.7
TGFBR1-202ENST00000374994 HTD2P86397 168 aa19.44■□□□□ 0.7
TGFBR1-202ENST00000374994 DEFB133Q30KQ1 61 aa19.44■□□□□ 0.7
TGFBR1-202ENST00000374994 C1orf140Q5VVS0 124 aa19.44■□□□□ 0.7
TGFBR1-202ENST00000374994 TSSK2Q96PF2 358 aa19.44■□□□□ 0.7
TGFBR1-202ENST00000374994 PCMT1P22061 227 aa19.44■□□□□ 0.7
TGFBR1-202ENST00000374994 TRMT12Q53H54 448 aaKnown RBP19.44■□□□□ 0.7
TGFBR1-202ENST00000374994 GRINAQ7Z429 371 aa19.44■□□□□ 0.7
TGFBR1-202ENST00000374994 FGGYQ96C11 551 aa19.44■□□□□ 0.7
TGFBR1-202ENST00000374994 RBMXL1Q96E39 390 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms