RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 THAP7Q9BT49 309 aaPredicted RBP7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 DDA1Q9BW61 102 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 OR2B2Q9GZK3 357 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 TSPAN10Q9H1Z9 355 aaPredicted RBP7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 SLCO5A1Q9H2Y9 848 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 METTL7AQ9H8H3 244 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 PLEKHA1Q9HB21 404 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 TIGARQ9NQ88 270 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 KLRF1Q9NZS2 232 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 NPIPA1Q9UND3 350 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 CACNA1EQ15878 2313 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 TNRC6BQ9UPQ9 1833 aaKnown RBP7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 TRBV5-7A0A0A0MS05 114 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 IGLV1-36A0A0B4J1U3 117 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 A0A0G2JK05 382 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 MEIOCA2RUB1 952 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 LIPT2A6NK58 231 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 E9PI62 339 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 GABARAPH6UMI1 98 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 SULT1C2O00338 296 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 PEX14O75381 377 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 CBR3O75828 277 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 CCNKO75909 580 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 ZFPL1O95159 310 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 PMS2P2O95744 297 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 ABHD16AO95870 558 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 F13BP05160 661 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 GYPBP06028 91 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 ERCC1P07992 297 aaPredicted RBP7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 CLUP10909 449 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 ELK1P19419 428 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 FSTP19883 344 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 SLC6A1P30531 599 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 PTGS2P35354 604 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 CD79BP40259 229 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 FOLR3P41439 243 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 GUCA1AP43080 201 aaPredicted RBP7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 EIF2B2P49770 351 aaKnown RBP7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 ART1P52961 327 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 DSCR4P56555 118 aaPredicted RBP7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 CSNK2A1P68400 391 aaPredicted RBP7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 CHAF1BQ13112 559 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 SLC17A1Q14916 467 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 POU4F3Q15319 338 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 ANGPT1Q15389 498 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 KCNMB1Q16558 191 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 NDUFAF6Q330K2 333 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 TP53I3Q53FA7 332 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 TRIM61Q5EBN2 209 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 PHF19Q5T6S3 580 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 TMEM164Q5U3C3 297 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 LANCL3Q6ZV70 420 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 LINGO2Q7L985 606 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 PLCZ1Q86YW0 608 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 LIX1LQ8IVB5 337 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 GLB1L2Q8IW92 636 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 ZNF676Q8N7Q3 588 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 ZFP41Q8N8Y5 198 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 GATSQ8NAP1 163 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 OR2G2Q8NGZ5 317 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 OR6X1Q8NH79 312 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 ZNF671Q8TAW3 534 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 SNRNP27Q8WVK2 155 aaKnown RBP7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 ASB13Q8WXK3 278 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 MCHR2Q969V1 340 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 MIB2Q96AX9 1013 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 MED30Q96HR3 178 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 OXGR1Q96P68 337 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 ZNF587Q96SQ5 575 aaPredicted RBP7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 PHOX2BQ99453 314 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 NUDT16L1Q9BRJ7 211 aaKnown RBP7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 NAA11Q9BSU3 229 aaPredicted RBP7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 GPR87Q9BY21 358 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 ANGPTL4Q9BY76 406 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 SYT4Q9H2B2 425 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 DPAGT1Q9H3H5 408 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 RERGLQ9H628 205 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 SRA1Q9HD15 236 aaKnown RBP7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 ING3Q9NXR8 418 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 KLHL13Q9P2N7 655 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 ZNF221Q9UK13 617 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 NUBP2Q9Y5Y2 271 aa7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 SIRT4Q9Y6E7 314 aaPredicted RBP7.85□□□□□ -1.15
SNRNP40-202ENST00000373720 IGHV1-45A0A0A0MS14 117 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 OR2W5A6NFC9 320 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 TMEM200CA6NKL6 621 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 OR4C45A6NMZ5 311 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 B4DXG7 233 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 ZNF593O00488 134 aaPredicted RBP7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 SOX1O00570 391 aaPredicted RBP7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 ADAM10O14672 748 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 GNB5O14775 395 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 KHNYNO15037 678 aaKnown RBP7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 OIP5O43482 229 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 SCO2O43819 266 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 SELENOFO60613 162 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 SLC16A7O60669 478 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 SERPINI2O75830 405 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 DKK1O94907 266 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 IGHG1P01857 330 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms