RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 IGLON5A6NGN9 336 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 PRSS44E7EML9 344 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 F5H0A9 414 aaPredicted RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 BLOC1S5-TXNDC5H3BN57 136 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 SNAPINO95295 136 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 RPN2P04844 631 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 GP1BAP07359 652 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 ITGA5P08648 1049 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 CD1CP29017 333 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 PEBP1P30086 187 aaKnown RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 EIF2B1Q14232 305 aaKnown RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 SWI5Q1ZZU3 235 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 MPP7Q5T2T1 576 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 C3orf33Q6P1S2 294 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 CFAP161Q6P656 301 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 C1orf229Q6ZS94 237 aaPredicted RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF627Q7L945 461 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 RNF144BQ7Z419 303 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 RNF180Q86T96 592 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 ASPGQ86U10 573 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 FOXRED2Q8IWF2 684 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 ETFBKMTQ8IXQ9 262 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 DND1Q8IYX4 353 aaKnown RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 BEST3Q8N1M1 668 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 OR2L13Q8N349 312 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 FRMD1Q8N878 549 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 OR4E2Q8NGC2 313 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 OR4A4PQ8NGN8 299 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 OR2L2Q8NH16 312 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 THAP6Q8TBB0 222 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 SFT2D1Q8WV19 159 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 PPP1R1CQ8WVI7 109 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 EDARADDQ8WWZ3 215 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 OVCA2Q8WZ82 227 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 ZPBPQ9BS86 351 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 WDR76Q9H967 626 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 GPN1Q9HCN4 374 aaPredicted RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 OR2S2Q9NQN1 319 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 GSN-AS1Q9NRJ2 163 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 FAM86C1Q9NVL1 165 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 IKZF2Q9UKS7 526 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 SLC22A13Q9Y226 551 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 SLC35A3Q9Y2D2 325 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 EML5Q05BV3 1969 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 RTTNQ86VV8 2226 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 TRAV1-2A0A0B4J238 106 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 TMEM218A2RU14 115 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 A6NCN8 305 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 POM121BA6NF01 834 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 OR5H14A6NHG9 310 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 CACNB4O00305 520 aaPredicted RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 OGG1O15527 345 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 P2RX6O15547 441 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 GATCO43716 136 aaKnown RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 RBBP9O75884 186 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 ARL6IP5O75915 188 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 PAK4O96013 591 aaPredicted RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 OR4E1P0C645 316 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 PVRP15151 417 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 CPN1P15169 458 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 DDX6P26196 483 aaKnown RBP eCLIP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 GABRA3P34903 492 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 DLSTP36957 453 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 VIPR2P41587 438 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 CDKN2AP42771 156 aaKnown RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 PPT1P50897 306 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 RAG2P55895 527 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 ST8SIA6P61647 398 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 DEFB103AP81534 67 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 BDH1Q02338 343 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 SCRN3Q0VDG4 424 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 PDZK1IP1Q13113 114 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 IL10RAQ13651 578 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 RUNX2Q13950 521 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 KRT33BQ14525 404 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 ELAVL1Q15717 326 aaKnown RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 C9orf152Q5JTZ5 239 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 ARHGAP40Q5TG30 622 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 LIPNQ5VXI9 398 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 TPGS2Q68CL5 300 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 MAMDC2Q7Z304 686 aaPredicted RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 ANKRD33Q7Z3H0 272 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 DCUN1D3Q8IWE4 304 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 ADAD2Q8NCV1 583 aaKnown RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 OR5K2Q8NHB8 316 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 UBE2E3Q969T4 207 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 FAM46BQ96A09 425 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 TMEM106AQ96A25 262 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 TIFAQ96CG3 184 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 RRNAD1Q96FB5 475 aaKnown RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 TRMT2BQ96GJ1 504 aaKnown RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 CAMK1GQ96NX5 476 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 CNN2Q99439 309 aaKnown RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 NAA11Q9BSU3 229 aaPredicted RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 ACTRT3Q9BYD9 372 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 LMAN2LQ9H0V9 348 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 TCF7L1Q9HCS4 588 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 APMAPQ9HDC9 416 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 KRCC1Q9NPI7 259 aaPredicted RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 SLC2A4RGQ9NR83 387 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms