RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 CCDC160A6NGH7 325 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 ZNF716A6NP11 495 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 NPIPA2E9PIF3 369 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 NPIPA3F8WFD2 350 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 IGHG1P01857 330 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 OR2T7P0C7T2 308 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 TGFBR2P37173 567 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 LIPAP38571 399 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 CD79BP40259 229 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 CENPAP49450 140 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 CLDN17P56750 224 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 ZNF85Q03923 595 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 GALEQ14376 348 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 ARMCX4Q5H9R4 360 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 SLC35F2Q8IXU6 374 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 TIGD4Q8IY51 512 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 KLHL36Q8N4N3 616 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 OR2T27Q8NH04 317 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 ZNF420Q8TAQ5 688 aaPredicted RBP21.26■□□□□ 0.99
SNX3-203ENST00000368979 SMAP2Q8WU79 429 aaPredicted RBP21.26■□□□□ 0.99
SNX3-203ENST00000368979 ROBO4Q8WZ75 1007 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 NMD3Q96D46 503 aaKnown RBP21.26■□□□□ 0.99
SNX3-203ENST00000368979 OPALINQ96PE5 141 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 FUNDC2Q9BWH2 189 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 RERGLQ9H628 205 aa21.26■□□□□ 0.99
SNX3-203ENST00000368979 PAQR5Q9NXK6 330 aaPredicted RBP21.26■□□□□ 0.99
SNX3-203ENST00000368979 RSL24D1Q9UHA3 163 aaKnown RBP21.26■□□□□ 0.99
SNX3-203ENST00000368979 CYTIPO60759 359 aa21.25■□□□□ 0.99
SNX3-203ENST00000368979 BLVRAP53004 296 aa21.25■□□□□ 0.99
SNX3-203ENST00000368979 RPS3AP61247 264 aaKnown RBP21.25■□□□□ 0.99
SNX3-203ENST00000368979 SRYQ05066 204 aa21.25■□□□□ 0.99
SNX3-203ENST00000368979 FMODQ06828 376 aa21.25■□□□□ 0.99
SNX3-203ENST00000368979 CAMK2DQ13557 499 aa21.25■□□□□ 0.99
SNX3-203ENST00000368979 ETFDHQ16134 617 aa21.25■□□□□ 0.99
SNX3-203ENST00000368979 DNM1P34Q6PK57 102 aa21.25■□□□□ 0.99
SNX3-203ENST00000368979 SLC16A9Q7RTY1 509 aa21.25■□□□□ 0.99
SNX3-203ENST00000368979 ZIC4Q8N9L1 334 aa21.25■□□□□ 0.99
SNX3-203ENST00000368979 ISOC1Q96CN7 298 aa21.25■□□□□ 0.99
SNX3-203ENST00000368979 ZNF385AQ96PM9 386 aaKnown RBP21.25■□□□□ 0.99
SNX3-203ENST00000368979 TIMP4Q99727 224 aa21.25■□□□□ 0.99
SNX3-203ENST00000368979 ALG8Q9BVK2 526 aa21.25■□□□□ 0.99
SNX3-203ENST00000368979 NAA50Q9GZZ1 169 aaKnown RBP21.25■□□□□ 0.99
SNX3-203ENST00000368979 EXO5Q9H790 373 aa21.25■□□□□ 0.99
SNX3-203ENST00000368979 CAB39Q9Y376 341 aaPredicted RBP21.25■□□□□ 0.99
SNX3-203ENST00000368979 APC2O95996 2303 aa21.25■□□□□ 0.99
SNX3-203ENST00000368979 IGKV1D-43A0A0B4J1Z2 117 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 A0A1W2PQL4 384 aaPredicted RBP21.24■□□□□ 0.99
SNX3-203ENST00000368979 CENPBD1B2RD01 187 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 ZNF701M0R085 212 aaPredicted RBP21.24■□□□□ 0.99
SNX3-203ENST00000368979 HSMCR30P0CW71 290 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 CLRN1P58418 232 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 MLLT11Q13015 90 aaPredicted RBP21.24■□□□□ 0.99
SNX3-203ENST00000368979 FCRLAQ7L513 359 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 SNRNP27Q8WVK2 155 aaKnown RBP21.24■□□□□ 0.99
SNX3-203ENST00000368979 ABHD17AQ96GS6 310 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 DOK1Q99704 481 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 ARHGAP9Q9BRR9 750 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 TVP23AA6NH52 213 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 ZNF726A6NNF4 738 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 GPANK1O95872 356 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 SCG5P05408 212 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 CPN1P15169 458 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 PTGS2P35354 604 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 HCCSP53701 268 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 HIST3H3Q16695 136 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 THEM4Q5T1C6 240 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 ZNF322Q6U7Q0 402 aaPredicted RBP21.24■□□□□ 0.99
SNX3-203ENST00000368979 ANKRD13BQ86YJ7 626 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 SIAH3Q8IW03 269 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 RFLNBQ8N5W9 214 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 WDYHV1Q96HA8 205 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 RBP7Q96R05 134 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 TAAR6Q96RI8 345 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 ISYNA1Q9NPH2 558 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 ENPP5Q9UJA9 477 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 COPS3Q9UNS2 423 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 FLVCR1Q9Y5Y0 555 aa21.24■□□□□ 0.99
SNX3-203ENST00000368979 A0A1B0GVC2 190 aa21.23■□□□□ 0.99
SNX3-203ENST00000368979 KHDRBS3O75525 346 aaKnown RBP21.23■□□□□ 0.99
SNX3-203ENST00000368979 ZNF432O94892 652 aa21.23■□□□□ 0.99
SNX3-203ENST00000368979 TMBIM6P55061 237 aa21.23■□□□□ 0.99
SNX3-203ENST00000368979 RPUSD3Q6P087 351 aaKnown RBP21.23■□□□□ 0.99
SNX3-203ENST00000368979 SLC16A12Q6ZSM3 486 aa21.23■□□□□ 0.99
SNX3-203ENST00000368979 SSX6Q7RTT6 188 aa21.23■□□□□ 0.99
SNX3-203ENST00000368979 ERI1Q8IV48 349 aaKnown RBP21.23■□□□□ 0.99
SNX3-203ENST00000368979 FNDC8Q8TC99 324 aa21.23■□□□□ 0.99
SNX3-203ENST00000368979 SPRYD4Q8WW59 207 aaPredicted RBP21.23■□□□□ 0.99
SNX3-203ENST00000368979 GATAD2BQ8WXI9 593 aa21.23■□□□□ 0.99
SNX3-203ENST00000368979 EXTL1Q92935 676 aa21.23■□□□□ 0.99
SNX3-203ENST00000368979 OR2M2Q96R28 347 aa21.23■□□□□ 0.99
SNX3-203ENST00000368979 COA3Q9Y2R0 106 aaPredicted RBP21.23■□□□□ 0.99
SNX3-203ENST00000368979 A0A087WV48 116 aa21.22■□□□□ 0.99
SNX3-203ENST00000368979 CD36P16671 472 aa21.22■□□□□ 0.99
SNX3-203ENST00000368979 RGS6P49758 472 aa21.22■□□□□ 0.99
SNX3-203ENST00000368979 GLO1Q04760 184 aa21.22■□□□□ 0.99
SNX3-203ENST00000368979 ACSM1Q08AH1 577 aa21.22■□□□□ 0.99
SNX3-203ENST00000368979 INAQ16352 499 aa21.22■□□□□ 0.99
SNX3-203ENST00000368979 C3AR1Q16581 482 aa21.22■□□□□ 0.99
SNX3-203ENST00000368979 TSTQ16762 297 aaKnown RBP21.22■□□□□ 0.99
SNX3-203ENST00000368979 CARD17Q5XLA6 110 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms