RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 LYRM4Q9HD34 91 aa10.48□□□□□ -0.73
USF1-201ENST00000368019 EQTNQ9NQ60 294 aa10.48□□□□□ -0.73
USF1-201ENST00000368019 SDHAF2Q9NX18 166 aa10.48□□□□□ -0.73
USF1-201ENST00000368019 RDH8Q9NYR8 311 aa10.48□□□□□ -0.73
USF1-201ENST00000368019 MGAT4CQ9UBM8 478 aa10.48□□□□□ -0.73
USF1-201ENST00000368019 CHRNA9Q9UGM1 479 aa10.48□□□□□ -0.73
USF1-201ENST00000368019 PFDN2Q9UHV9 154 aa10.48□□□□□ -0.73
USF1-201ENST00000368019 NTNG1Q9Y2I2 539 aa10.48□□□□□ -0.73
USF1-201ENST00000368019 B3GALT1Q9Y5Z6 326 aa10.48□□□□□ -0.73
USF1-201ENST00000368019 KCNMB2Q9Y691 235 aa10.48□□□□□ -0.73
USF1-201ENST00000368019 B4E171 279 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 NDUFB2O95178 105 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 NTN1O95631 604 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 CFDP00746 253 aaPredicted RBP10.47□□□□□ -0.73
USF1-201ENST00000368019 HIST1H2ABP04908 130 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 MELTFP08582 738 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 ANKRD34CP0C6C1 535 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 CPMP14384 443 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 NFYAP23511 347 aaPredicted RBP10.47□□□□□ -0.73
USF1-201ENST00000368019 ACVR1BP36896 505 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 TSPAN7P41732 249 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 FASLGP48023 281 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 DIO1P49895 249 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 VSX2P58304 361 aaPredicted RBP10.47□□□□□ -0.73
USF1-201ENST00000368019 POU6F2P78424 691 aaPredicted RBP10.47□□□□□ -0.73
USF1-201ENST00000368019 CRYZQ08257 329 aaKnown RBP10.47□□□□□ -0.73
USF1-201ENST00000368019 ZNF267Q14586 743 aaPredicted RBP10.47□□□□□ -0.73
USF1-201ENST00000368019 TOMM20Q15388 145 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 LTB4RQ15722 352 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 TMEM71Q6P5X7 295 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 TFAP2EQ6VUC0 442 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 LINC00114Q6XXX2 140 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 HIST3H2AQ7L7L0 130 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 MEIOBQ8N635 442 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 AGBL5Q8NDL9 886 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 PFN4Q8NHR9 129 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 THEM6Q8WUY1 208 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 OIT3Q8WWZ8 545 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 RSC1A1Q92681 617 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 HIST1H2ACQ93077 130 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 PNPLA2Q96AD5 504 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 MIB2Q96AX9 1013 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 DACT3Q96B18 629 aaPredicted RBP10.47□□□□□ -0.73
USF1-201ENST00000368019 SLC22A18Q96BI1 424 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 SLC25A38Q96DW6 304 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 TM4SF19Q96DZ7 209 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 KLHL15Q96M94 604 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 SFXN2Q96NB2 322 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 DDOQ99489 341 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 MNTQ99583 582 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 PELOQ9BRX2 385 aaKnown RBP10.47□□□□□ -0.73
USF1-201ENST00000368019 DNTTIP1Q9H147 329 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 LDAHQ9H6V9 325 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 AUNIPQ9H7T9 357 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 C20orf141Q9NUB4 165 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 OCIAD1Q9NX40 245 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 TAS2R10Q9NYW0 307 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 OR6C2Q9NZP2 312 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 FOXJ3Q9UPW0 622 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 RCE1Q9Y256 329 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 ZNF281Q9Y2X9 895 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 PRKAB1Q9Y478 270 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 V9GY05 133 aa10.47□□□□□ -0.73
USF1-201ENST00000368019 TRBV2A0A0J9YWF9 115 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 A0A1W2PRG6 482 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 CIB4A0PJX0 185 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 UBE2QL1A1L167 161 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 ZC3H12DA2A288 527 aaKnown RBP10.46□□□□□ -0.73
USF1-201ENST00000368019 KHDRBS3O75525 346 aaKnown RBP10.46□□□□□ -0.73
USF1-201ENST00000368019 PPM1BO75688 479 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 RP2O75695 350 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 NKX2-2O95096 273 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 PPP1R3DO95685 299 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 EML2O95834 649 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 NMBP08949 121 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 FGF2P09038 288 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 LIFP15018 202 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 SRMP19623 302 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 CXCL2P19875 107 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 EDNRAP25101 427 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 NOS3P29474 1203 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 PEBP1P30086 187 aaKnown RBP10.46□□□□□ -0.73
USF1-201ENST00000368019 SSTR2P30874 369 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 S100A11P31949 105 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 ACTR1BP42025 376 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 VEGFCP49767 419 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 GPR143P51810 404 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 PSMA6P60900 246 aaKnown RBP10.46□□□□□ -0.73
USF1-201ENST00000368019 ACTR1AP61163 376 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.46□□□□□ -0.73
USF1-201ENST00000368019 Q6ZTK2 550 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 ZNF550Q7Z398 422 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 VN1R4Q7Z5H5 301 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 OR52I2Q8NH67 350 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 SLC37A2Q8TED4 501 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 ZFPM2Q8WW38 1151 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 CNOT9Q92600 299 aaKnown RBP10.46□□□□□ -0.73
USF1-201ENST00000368019 ELMOD3Q96FG2 381 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 PEX11GQ96HA9 241 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 MS4A3Q96HJ5 214 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms