RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ZNF738Q8NE65 137 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 IER2Q9BTL4 223 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 MEIKINA0A087WXM9 373 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 FGF3P11487 239 aaPredicted RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 NT5EP21589 574 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 PSMB6P28072 239 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 PBX2P40425 430 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 ATAT1Q5SQI0 421 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 TP53I13Q8NBR0 393 aaPredicted RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 OR51G2Q8NGK0 314 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 CRYGNQ8WXF5 182 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 RAB8BQ92930 207 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 NPAS1Q99742 590 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 KATNB1Q9BVA0 655 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 NPIPB15A6NHN6 443 aaPredicted RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 PIAS2O75928 621 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 F3P13726 295 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 HLA-GP17693 338 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 PCLAFQ15004 111 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 SOHLH2Q9NX45 425 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 FLVCR1Q9Y5Y0 555 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 EMC8O43402 210 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 ALOX12BO75342 701 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 SPATA31C1P0DKV0 1188 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 GOT1P17174 413 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 GIFP27352 417 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 AQP11Q8NBQ7 271 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 SLC23A2Q9UGH3 650 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 A8MXK9 166 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 RAB27BO00194 218 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 RPL38P63173 70 aaKnown RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 RHOGP84095 191 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 TMEM102Q8N9M5 508 aaPredicted RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 CPEB3Q8NE35 698 aaKnown RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 ZMIZ2Q8NF64 920 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 NDUFB2O95178 105 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 HOXA6P31267 233 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 KMT5CQ86Y97 462 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 TRAPPC2LQ9UL33 140 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 LACTBL1A8MY62 500 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 TGFB1I1O43294 461 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 GCGRP47871 477 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 SAXO2Q658L1 398 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 MFSD4AQ8N468 514 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 CSNK2A3Q8NEV1 391 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 SLC26A10Q8NG04 563 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 NEK7Q8TDX7 302 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 TSEN15Q8WW01 171 aaKnown RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 ZDHHC3Q9NYG2 299 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 SLC9B1P1A6NJY1 282 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 INSIG1O15503 277 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 SLC35E2BP0CK96 405 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 CRYBB1P53674 252 aaPredicted RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 OR2B8PP59922 312 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 PIN1Q13526 163 aaPredicted RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 SFTA2Q6UW10 78 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 TGIF2LXQ8IUE1 241 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 CSNK1A1LQ8N752 337 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF98A6NK75 572 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 CT45A10P0DMU9 189 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 GPR4P46093 362 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF528Q3MIS6 628 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 LIPNQ5VXI9 398 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 CTU1Q7Z7A3 348 aaKnown RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 OR10H4Q8NGA5 316 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 OR10H5Q8NGA6 315 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 JOSD2Q8TAC2 188 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 EBF1Q9UH73 591 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 TCHHQ07283 1943 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 EPHA2P29317 976 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 CNN3Q15417 329 aaKnown RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 GABRG1Q8N1C3 465 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 RELL2Q8NC24 303 aaPredicted RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 ATOH1Q92858 354 aaPredicted RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 GBA2Q9HCG7 927 aaPredicted RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 MYH9P35579 1960 aaKnown RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 LOC105369274A0A096LPK9 316 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 LOC102723532A0A0G2JNH3 316 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 A0A1W2PPH5 198 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 CACNG3O60359 315 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 T-ENOLP0DO92 83 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 ADRB3P13945 408 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 THBS4P35443 961 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF154Q13106 437 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 NOXRED1Q6NXP6 359 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 OR4N4Q8N0Y3 316 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 C20orf85Q9H1P6 137 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 DLL4Q9NR61 685 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 CDC123O75794 336 aaPredicted RBP3.46□□□□□ -1.85
SYNE1-207ENST00000367255 NSA2O95478 260 aaKnown RBP3.46□□□□□ -1.85
SYNE1-207ENST00000367255 GLDNQ6ZMI3 551 aaPredicted RBP3.46□□□□□ -1.85
SYNE1-207ENST00000367255 ARRDC2Q8TBH0 407 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 EID2BQ96D98 161 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 OR51I1Q9H343 314 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 TDP1Q9NUW8 608 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 B3GAT1Q9P2W7 334 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 CD207Q9UJ71 328 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 MYH7P12883 1935 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 TBC1D3DA0A087WVF3 549 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 TBC1D3LB9A6J9 549 aa3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms