RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 LAMB1P07942 1786 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 SHISA8B8ZZ34 492 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 CTSVO60911 334 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 FABP6P51161 128 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 RNF4P78317 190 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 EGLN1Q9GZT9 426 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 IGHV5-51A0A0C4DH38 117 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 SLC22A20A6NK97 555 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 SSX5O60225 188 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 GLCEO94923 617 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 PTTG1O95997 202 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 IFNA5P01569 189 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 S100A9P06702 114 aaKnown RBP10.59□□□□□ -0.71
SYNE1-204ENST00000367248 CCL4P13236 92 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 SLC35D3Q5M8T2 416 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 PTOV1Q86YD1 416 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 RPL3LQ92901 407 aaKnown RBP10.59□□□□□ -0.71
SYNE1-204ENST00000367248 COX14Q96I36 57 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 ARAP2Q8WZ64 1704 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 SERTM1A2A2V5 107 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 NOTOA8MTQ0 251 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 A8MV72 311 aaPredicted RBP10.59□□□□□ -0.71
SYNE1-204ENST00000367248 B4DXG7 233 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 CRYAAP02489 173 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 CD34P28906 385 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 LINC01555Q8NAE3 123 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 PFN4Q8NHR9 129 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 RAB39BQ96DA2 213 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 FKRPQ9H9S5 495 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 CHST11Q9NPF2 352 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 FRG2CA6NGY1 282 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 MPEG1Q2M385 716 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 STPG1Q5TH74 334 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 TP53TG5Q9Y2B4 290 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 DPM1O60762 260 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 SERPINE2P07093 398 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 OPRL1P41146 370 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 ABI3BPQ7Z7G0 1075 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 OR6V1Q8N148 313 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 BRIX1Q8TDN6 353 aaKnown RBP10.58□□□□□ -0.72
SYNE1-204ENST00000367248 SORCS2Q96PQ0 1159 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 NUDT9Q9BW91 350 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 DVL2O14641 736 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 SURF4O15260 269 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 TSPAN9O75954 239 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 CRYABP02511 175 aaKnown RBP10.58□□□□□ -0.72
SYNE1-204ENST00000367248 WIPI1Q5MNZ9 446 aaPredicted RBP10.58□□□□□ -0.72
SYNE1-204ENST00000367248 ZNF468Q5VIY5 522 aaPredicted RBP10.58□□□□□ -0.72
SYNE1-204ENST00000367248 FCRL6Q6DN72 434 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 GJC3Q8NFK1 279 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 OR2A5Q96R48 311 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 NOX4Q9NPH5 578 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 NTNG1Q9Y2I2 539 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 COA3Q9Y2R0 106 aaPredicted RBP10.58□□□□□ -0.72
SYNE1-204ENST00000367248 COL24A1Q17RW2 1714 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 EPOPA6NHQ4 379 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 TOXO94900 526 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 ACKR1Q16570 336 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 PGAP1Q75T13 922 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 BCDIN3DQ7Z5W3 292 aaKnown RBP10.58□□□□□ -0.72
SYNE1-204ENST00000367248 CARFQ8N187 725 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 CISD2Q8N5K1 135 aaKnown RBP10.58□□□□□ -0.72
SYNE1-204ENST00000367248 ACBD4Q8NC06 268 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 PIGTQ969N2 578 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 PLEKHA3Q9HB20 300 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 NKX6-3A6NJ46 265 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 CDK4P11802 303 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 RGS19P49795 217 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 PCBP4P57723 403 aaKnown RBP10.58□□□□□ -0.72
SYNE1-204ENST00000367248 PLK5Q496M5 336 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 GSG1LQ6UXU4 331 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 ZNF620Q6ZNG0 422 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 ST7LQ8TDW4 575 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 C22orf15Q8WYQ4 148 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 SPACA9Q96E40 222 aaPredicted RBP10.58□□□□□ -0.72
SYNE1-204ENST00000367248 NDRG4Q9ULP0 352 aaKnown RBP10.58□□□□□ -0.72
SYNE1-204ENST00000367248 SLC34A2O95436 690 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 TFAP2AP05549 437 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 EVI2BP34910 448 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 STEAP3Q658P3 488 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 OR52N1Q8NH53 320 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 OR1L3Q8NH93 324 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 PLAC1Q9HBJ0 212 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 OCIAD1Q9NX40 245 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 KLK4Q9Y5K2 254 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 CEPT1Q9Y6K0 416 aa10.58□□□□□ -0.72
SYNE1-204ENST00000367248 A6NHS1 94 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 TNFRSF10AO00220 468 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 FGL1Q08830 312 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 GPR176Q14439 515 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 GPR157Q5UAW9 335 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 RTL6Q6ICC9 239 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 ZNF695Q8IW36 515 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 SNAPC3Q92966 411 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 BOD1Q96IK1 185 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 GNB4Q9HAV0 340 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 TAS2R16Q9NYV7 291 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 FAM96BQ9Y3D0 163 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 GMEB1Q9Y692 573 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 CTDSP2O14595 271 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms