RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 KLHL12Q53G59 568 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 WDFY1Q8IWB7 410 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 BBS1Q8NFJ9 593 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 PTP4A1Q93096 173 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 TMEM45BQ96B21 275 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 NMNAT2Q9BZQ4 307 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 OR51V1Q9H2C8 321 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 CALHM2Q9HA72 323 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 BCO1Q9HAY6 547 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 GP6Q9HCN6 339 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 PLCXD1Q9NUJ7 323 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 ING1Q9UK53 422 aaPredicted RBP18.31■□□□□ 0.52
SHISA4-201ENST00000362011 FREM1Q5H8C1 2179 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 RP1L1Q8IWN7 2480 aaPredicted RBP18.31■□□□□ 0.52
SHISA4-201ENST00000362011 SLC22A23A1A5C7 686 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 PGA4P0DJD7 388 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 PGA3P0DJD8 388 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 SLC2A5P22732 501 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 APOFQ13790 326 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 ESPL1Q14674 2120 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 C1orf185Q5T7R7 199 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 CARD17Q5XLA6 110 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 NSUN5P2Q63ZY6 315 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 MEPCEQ7L2J0 689 aaKnown RBP18.3■□□□□ 0.52
SHISA4-201ENST00000362011 AAED1Q7RTV5 226 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 FNDC8Q8TC99 324 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 WNT2BQ93097 391 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 ZNF775Q96BV0 537 aaPredicted RBP18.3■□□□□ 0.52
SHISA4-201ENST00000362011 OR2M2Q96R28 347 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 SYT4Q9H2B2 425 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 GLRX2Q9NS18 164 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 ASB6Q9NWX5 421 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.3■□□□□ 0.52
SHISA4-201ENST00000362011 NOSIPQ9Y314 301 aaKnown RBP18.3■□□□□ 0.52
SHISA4-201ENST00000362011 TPRKBQ9Y3C4 175 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 RPL36Q9Y3U8 105 aaKnown RBP18.3■□□□□ 0.52
SHISA4-201ENST00000362011 FKBP7Q9Y680 259 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 ITPR2Q14571 2701 aa18.3■□□□□ 0.52
SHISA4-201ENST00000362011 CD8B2A6NJW9 211 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 PRRG2O14669 202 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 XPNPEP2O43895 674 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 GYPBP06028 91 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 RPSAP08865 295 aaKnown RBP18.29■□□□□ 0.52
SHISA4-201ENST00000362011 HOXD4P09016 255 aaPredicted RBP18.29■□□□□ 0.52
SHISA4-201ENST00000362011 CLUP10909 449 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 DBTP11182 482 aaKnown RBP18.29■□□□□ 0.52
SHISA4-201ENST00000362011 NR2C1P13056 603 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 SPI1P17947 270 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 CRHBPP24387 322 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 HTR1FP30939 366 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 RPS7P62081 194 aaKnown RBP18.29■□□□□ 0.52
SHISA4-201ENST00000362011 SLC35D3Q5M8T2 416 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 LCN1P1Q5VSP4 162 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 DNM1P34Q6PK57 102 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 RPTNQ6XPR3 784 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 TUSC5Q8IXB3 177 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 SYT14Q8NB59 555 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 OR2T4Q8NH00 348 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 RBP7Q96R05 134 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 MRPL13Q9BYD1 178 aaKnown RBP18.29■□□□□ 0.52
SHISA4-201ENST00000362011 CLEC4AQ9UMR7 237 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 DOPEY1Q5JWR5 2465 aa18.29■□□□□ 0.52
SHISA4-201ENST00000362011 CCDC182A6NF36 153 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 SLC22A31A6NKX4 558 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 SLC43A1O75387 559 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 ZNF432O94892 652 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 YES1P07947 543 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 CRABP1P29762 137 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 CSNK1A1P48729 337 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 SELENOPP49908 381 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 ZNF91Q05481 1191 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 TMED1Q13445 227 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 KCTD21Q4G0X4 260 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 TMEM123Q8N131 208 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 OR6N1Q8NGY5 312 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 INTS12Q96CB8 462 aaKnown RBP18.28■□□□□ 0.52
SHISA4-201ENST00000362011 GMPPAQ96IJ6 420 aaPredicted RBP18.28■□□□□ 0.52
SHISA4-201ENST00000362011 TM9SF2Q99805 663 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 NUAK2Q9H093 628 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 SRA1Q9HD15 236 aaKnown RBP18.28■□□□□ 0.52
SHISA4-201ENST00000362011 AMBNQ9NP70 447 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 PARPBPQ9NWS1 579 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 WARS2Q9UGM6 360 aaKnown RBP18.28■□□□□ 0.52
SHISA4-201ENST00000362011 MOKQ9UQ07 419 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 ZNF835Q9Y2P0 537 aa18.28■□□□□ 0.52
SHISA4-201ENST00000362011 INTS1Q8N201 2190 aaKnown RBP18.28■□□□□ 0.52
SHISA4-201ENST00000362011 PRRC2CQ9Y520 2896 aaKnown RBP18.28■□□□□ 0.52
SHISA4-201ENST00000362011 HIVEP3Q5T1R4 2406 aa18.27■□□□□ 0.52
SHISA4-201ENST00000362011 SLC16A7O60669 478 aa18.27■□□□□ 0.52
SHISA4-201ENST00000362011 SS18L1O75177 396 aaPredicted RBP18.27■□□□□ 0.52
SHISA4-201ENST00000362011 MRPL33O75394 65 aaKnown RBP18.27■□□□□ 0.52
SHISA4-201ENST00000362011 GLCEO94923 617 aa18.27■□□□□ 0.52
SHISA4-201ENST00000362011 PYCR1P32322 319 aa18.27■□□□□ 0.52
SHISA4-201ENST00000362011 GABARAPL2P60520 117 aa18.27■□□□□ 0.52
SHISA4-201ENST00000362011 MRPL49Q13405 166 aaKnown RBP18.27■□□□□ 0.52
SHISA4-201ENST00000362011 EIF2S3LQ2VIR3 472 aaKnown RBP18.27■□□□□ 0.52
SHISA4-201ENST00000362011 THEM4Q5T1C6 240 aa18.27■□□□□ 0.52
SHISA4-201ENST00000362011 OR2A2Q6IF42 318 aa18.27■□□□□ 0.52
SHISA4-201ENST00000362011 OR6V1Q8N148 313 aa18.27■□□□□ 0.52
SHISA4-201ENST00000362011 ZNF540Q8NDQ6 660 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms