RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 HSPB2Q16082 182 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 NUDT19A8MXV4 375 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 TRAF3IP2O43734 574 aaPredicted RBP8.95□□□□□ -0.98
CUX1-203ENST00000360264 FADS1O60427 444 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 DHRS4L1P0CG22 281 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 LMNTD1Q8N9Z9 388 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 PSD2Q9BQI7 771 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 PMS2P1A4D2B8 440 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 CD27P26842 260 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 CCR7P32248 378 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 CSNK1EP49674 416 aaKnown RBP8.95□□□□□ -0.98
CUX1-203ENST00000360264 GAB1Q13480 694 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 C6orf15Q6UXA7 325 aaPredicted RBP8.95□□□□□ -0.98
CUX1-203ENST00000360264 DUSP19Q8WTR2 217 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 OR8G3PP0DMU2 310 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 MBOAT2Q6ZWT7 520 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 HOXD9P28356 352 aaPredicted RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 CTBSQ01459 385 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 EBPQ15125 230 aaKnown RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 RPE65Q16518 533 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 OR7E24Q6IFN5 339 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 SPRED1Q7Z699 444 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 LGI3Q8N145 548 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 OR13C2Q8NGS9 318 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 HRASLS5Q96KN8 279 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 SLC35A2P78381 396 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 B3GNT8Q7Z7M8 397 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 CIB3Q96Q77 187 aaPredicted RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 GON7Q9BXV9 100 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 SELENOIQ9C0D9 397 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 N4BP2Q86UW6 1770 aaPredicted RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 HPGDSO60760 199 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 PLXDC2Q6UX71 529 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 SCD5Q86SK9 330 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 EMG1Q92979 244 aaKnown RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 S1PR3Q99500 378 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 KIR3DX1Q9H7L2 352 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 KLF13Q9Y2Y9 288 aaPredicted RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 ATP6V1G2-DDX39BF2Z307 99 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 HMGN2P05204 90 aaKnown RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 SSTR4P31391 388 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 TLE1Q04724 770 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 SEMA3BQ13214 749 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 FJX1Q86VR8 437 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 DCBLD2Q96PD2 775 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 MRPS28Q9Y2Q9 187 aaKnown RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 H0YIG0 161 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 DVL1O14640 695 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 ADRA2CP18825 462 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 DVL1P1P54792 670 aaPredicted RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 HIST2H3PS2Q5TEC6 136 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 PAPD4Q6PIY7 484 aaKnown RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 SARAFQ96BY9 339 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 NIPSNAP3BQ9BS92 247 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 EXOSC3Q9NQT5 275 aaKnown RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 ZIC2O95409 532 aaPredicted RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 PCK2Q16822 640 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 PLPP6Q8IY26 295 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 MORN4Q8NDC4 146 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 OR2T11Q8NH01 316 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 PRSS16Q9NQE7 514 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 TCRBV3S1A0A5B6 114 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 MEIOCA2RUB1 952 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 DOK2O60496 412 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 MGST1P10620 155 aaKnown RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 C4orf17Q53FE4 359 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 TMEFF1Q8IYR6 380 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 MRPL38Q96DV4 380 aaKnown RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 MED16Q9Y2X0 877 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 HOXD11P31277 338 aaPredicted RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 GDNFP39905 211 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 GTDC1Q4AE62 458 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 MDGA2Q7Z553 956 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 OR2AE1Q8NHA4 323 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 H1FXQ92522 213 aaKnown RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 ARRDC3Q96B67 414 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 METTL17Q9H7H0 456 aaPredicted RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 LIN7CQ9NUP9 197 aaKnown RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 CHRNA9Q9UGM1 479 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 PRAMEF25A6NGN4 478 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 C4BP0C0L5 1744 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 HOXD12P35452 270 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 BCL7AQ4VC05 210 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 ZNF626Q68DY1 528 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 DESI1Q6ICB0 168 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 LSMEM2Q8N112 164 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 KCNRGQ8N5I3 272 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 TTC9BQ8N6N2 239 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 LCORQ96JN0 433 aaPredicted RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 DHRS4Q9BTZ2 278 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 ACKR3P25106 362 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 UBE2G1P62253 170 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 NTHL1P78549 312 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 ERHP84090 104 aaKnown RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 ZP2Q05996 745 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 PTCRAQ6ISU1 281 aaPredicted RBP8.94□□□□□ -0.98
CUX1-203ENST00000360264 LGALS14Q8TCE9 139 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 A0A1B0GUL6 1792 aa8.94□□□□□ -0.98
CUX1-203ENST00000360264 ANKRD31Q8N7Z5 1873 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms