RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 SLC6A20Q9NP91 592 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 MON2Q7Z3U7 1717 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 NWD2Q9ULI1 1742 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 C5orf49A4QMS7 147 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 TMEM235A6NFC5 223 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 ICMTO60725 284 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 PRAMEF11O60813 436 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 TIMP1P01033 207 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 RPLP1P05386 114 aaKnown RBP9.03□□□□□ -0.96
CHD3-202ENST00000358181 DRD2P14416 443 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 GCSHP23434 173 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 IRS1P35568 1242 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 TAGLN2P37802 199 aaKnown RBP9.03□□□□□ -0.96
CHD3-202ENST00000358181 MTNR1AP48039 350 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 OR10A3P58181 314 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 PLPP5Q8NEB5 264 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 OR4M1Q8NGD0 313 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 ZNF486Q96H40 463 aaPredicted RBP9.03□□□□□ -0.96
CHD3-202ENST00000358181 NAP1L6A6NFF2 107 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 HMGCLP35914 325 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 DCTP40126 519 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 DEFB103AP81534 67 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 SLC10A2Q12908 348 aaPredicted RBP9.03□□□□□ -0.96
CHD3-202ENST00000358181 SELPLGQ14242 412 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 MCOLN1Q9GZU1 580 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 GPR173Q9NS66 373 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 MS4A18H0YCH9 400 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 AGFG2O95081 481 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 IAPPP10997 89 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 SELEP16581 610 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 PSMB5P28074 263 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 EPHA2P29317 976 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 RRN3P1Q2M238 152 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 MS4A18Q3C1V0 323 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 ZNF678Q5SXM1 525 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 CLVS2Q5SYC1 327 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 CDCA2Q69YH5 1023 aaPredicted RBP9.03□□□□□ -0.96
CHD3-202ENST00000358181 SLC35E4Q6ICL7 350 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 DPPA2Q7Z7J5 298 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 ACVR1CQ8NER5 493 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 OR9Q2Q8NGE9 314 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 FAXDC2Q96IV6 333 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 ZNF576Q9H609 170 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 CHD4Q14839 1912 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 PLIN4Q96Q06 1357 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 MKRN2OSH3BPM6 223 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 ECI1P42126 302 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 TBCEQ15813 527 aaPredicted RBP9.03□□□□□ -0.96
CHD3-202ENST00000358181 SPATA46Q5T0L3 261 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 CPOQ8IVL8 374 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 ADGRG5Q8IZF4 528 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 AQP12BA6NM10 295 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 ZNF264O43296 627 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 MYF6P23409 242 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 PTP4A2Q12974 167 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 AGERQ15109 404 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 CPZQ66K79 652 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 CLEC14AQ86T13 490 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.03□□□□□ -0.96
CHD3-202ENST00000358181 MGLLQ99685 303 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 ABHD6Q9BV23 337 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 OR52A5Q9H2C5 316 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 C1orf198Q9H425 327 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 ARFGEF2Q9Y6D5 1785 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 CYBAP13498 195 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 EN2P19622 333 aaPredicted RBP9.03□□□□□ -0.96
CHD3-202ENST00000358181 CDKN2DP55273 166 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 UBE2MP61081 183 aaKnown RBP9.03□□□□□ -0.96
CHD3-202ENST00000358181 LTBQ06643 244 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 SLC6A18Q96N87 628 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 RTL8AQ9BWD3 113 aa9.03□□□□□ -0.96
CHD3-202ENST00000358181 SERPINE3A8MV23 424 aa9.02□□□□□ -0.96
CHD3-202ENST00000358181 CSF1P09603 554 aa9.02□□□□□ -0.96
CHD3-202ENST00000358181 TAS2R46P59540 309 aa9.02□□□□□ -0.96
CHD3-202ENST00000358181 RPS23P62266 143 aaKnown RBP9.02□□□□□ -0.96
CHD3-202ENST00000358181 CACNG7P62955 275 aa9.02□□□□□ -0.96
CHD3-202ENST00000358181 SORDQ00796 357 aa9.02□□□□□ -0.96
CHD3-202ENST00000358181 VAMP3Q15836 100 aa9.02□□□□□ -0.96
CHD3-202ENST00000358181 C18orf63Q68DL7 685 aa9.02□□□□□ -0.96
CHD3-202ENST00000358181 PSAPL1Q6NUJ1 521 aa9.02□□□□□ -0.96
CHD3-202ENST00000358181 CMASQ8NFW8 434 aaPredicted RBP9.02□□□□□ -0.96
CHD3-202ENST00000358181 BCO1Q9HAY6 547 aa9.02□□□□□ -0.96
CHD3-202ENST00000358181 BET1LQ9NYM9 111 aa9.02□□□□□ -0.96
CHD3-202ENST00000358181 RPL26L1Q9UNX3 145 aaKnown RBP9.02□□□□□ -0.96
CHD3-202ENST00000358181 NUMBLQ9Y6R0 609 aa9.02□□□□□ -0.96
CHD3-202ENST00000358181 HLA-HP01893 362 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 SBK2P0C263 348 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 FAM189BP81408 668 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 EMX2Q04743 252 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 ZNF816Q0VGE8 651 aaPredicted RBP9.02□□□□□ -0.97
CHD3-202ENST00000358181 MORN1Q5T089 497 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 MARCH8Q5T0T0 291 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 STEAP1BQ6NZ63 245 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 ERMP1Q7Z2K6 904 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 TMEM179BQ7Z7N9 219 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 LRRTM1Q86UE6 522 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 SLC30A7Q8NEW0 376 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 MAFAQ8NHW3 353 aaPredicted RBP9.02□□□□□ -0.97
CHD3-202ENST00000358181 ISG20Q96AZ6 181 aaKnown RBP9.02□□□□□ -0.97
CHD3-202ENST00000358181 C3orf30Q96M34 536 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms