RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 LYZL6O75951 148 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 HMGN1P05114 100 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 ITGA5P08648 1049 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 QDPRP09417 244 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 PPP3CBP16298 524 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 HIST1H1CP16403 213 aaKnown RBP13.68□□□□□ -0.22
TRIM13-201ENST00000356017 CDK5Q00535 292 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 SLC34A1Q06495 639 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 RIPK1Q13546 671 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 GINS1Q14691 196 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 CEACAM16Q2WEN9 425 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 PGGHGQ32M88 737 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 LRFN4Q6PJG9 635 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 ZNF433Q8N7K0 673 aaPredicted RBP13.68□□□□□ -0.22
TRIM13-201ENST00000356017 MCHR2Q969V1 340 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 PRRG3Q9BZD7 231 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 SLC24A3Q9HC58 644 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 NDRG3Q9UGV2 375 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 SLC22A23A1A5C7 686 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 ZNF99A8MXY4 864 aaPredicted RBP13.68□□□□□ -0.22
TRIM13-201ENST00000356017 CASQ2O14958 399 aaPredicted RBP13.68□□□□□ -0.22
TRIM13-201ENST00000356017 DHHO43323 396 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 MITFO75030 526 aaPredicted RBP13.68□□□□□ -0.22
TRIM13-201ENST00000356017 RENP00797 406 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 IFNGP01579 166 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 GRK5P34947 590 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 ZNF133P52736 654 aaPredicted RBP13.68□□□□□ -0.22
TRIM13-201ENST00000356017 NPRL3Q12980 569 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 PTGES3Q15185 160 aaKnown RBP13.68□□□□□ -0.22
TRIM13-201ENST00000356017 PHYHD1Q5SRE7 291 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 SLC35F1Q5T1Q4 408 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 C1QTNF12Q5T7M4 302 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 LINGO2Q7L985 606 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 BHLHA15Q7RTS1 189 aaPredicted RBP13.68□□□□□ -0.22
TRIM13-201ENST00000356017 SSX8Q7RTT4 187 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 P2RY8Q86VZ1 359 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 OR52E2Q8NGJ4 325 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 OR4Q3Q8NH05 313 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 OR4K13Q8NH42 304 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 BOD1Q96IK1 185 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 MUS81Q96NY9 551 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 GABARAPL3Q9BY60 117 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 SLC25A19Q9HC21 320 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 NPDC1Q9NQX5 325 aaPredicted RBP13.68□□□□□ -0.22
TRIM13-201ENST00000356017 VSX1Q9NZR4 365 aaPredicted RBP13.68□□□□□ -0.22
TRIM13-201ENST00000356017 KLHL21Q9UJP4 597 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 RIIAD1A6NNX1 92 aa13.67□□□□□ -0.22
TRIM13-201ENST00000356017 CLDN1O95832 211 aa13.67□□□□□ -0.22
TRIM13-201ENST00000356017 GRNP28799 593 aaKnown RBP13.67□□□□□ -0.22
TRIM13-201ENST00000356017 CDKN2AP42771 156 aaKnown RBP13.67□□□□□ -0.22
TRIM13-201ENST00000356017 ZNF84P51523 738 aa13.67□□□□□ -0.22
TRIM13-201ENST00000356017 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRIM13-201ENST00000356017 C10orf128Q5T292 105 aa13.67□□□□□ -0.22
TRIM13-201ENST00000356017 C9orf135Q5VTT2 229 aa13.67□□□□□ -0.22
TRIM13-201ENST00000356017 LEG1Q6P5S2 330 aa13.67□□□□□ -0.22
TRIM13-201ENST00000356017 ANKRD16Q6P6B7 361 aa13.67□□□□□ -0.22
TRIM13-201ENST00000356017 DNM1P34Q6PK57 102 aa13.67□□□□□ -0.22
TRIM13-201ENST00000356017 C17orf78Q8N4C9 275 aa13.67□□□□□ -0.22
TRIM13-201ENST00000356017 PACRGLQ8N7B6 248 aa13.67□□□□□ -0.22
TRIM13-201ENST00000356017 NMD3Q96D46 503 aaKnown RBP13.67□□□□□ -0.22
TRIM13-201ENST00000356017 PSMG3-AS1Q96PY0 264 aa13.67□□□□□ -0.22
TRIM13-201ENST00000356017 NMNAT3Q96T66 252 aa13.67□□□□□ -0.22
TRIM13-201ENST00000356017 SLC29A1Q99808 456 aa13.67□□□□□ -0.22
TRIM13-201ENST00000356017 CMC2Q9NRP2 79 aa13.67□□□□□ -0.22
TRIM13-201ENST00000356017 HELZ2Q9BYK8 2649 aaKnown RBP13.67□□□□□ -0.22
TRIM13-201ENST00000356017 FLNCQ14315 2725 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 DOPEY1Q5JWR5 2465 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 TUBAL3A6NHL2 446 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 H7C1C5 153 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 RAD51DO75771 328 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 HOXB1P14653 301 aaPredicted RBP13.66□□□□□ -0.22
TRIM13-201ENST00000356017 ZNF3P17036 446 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 CRABP1P29762 137 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 HOXC12P31275 282 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 GUCA1AP43080 201 aaPredicted RBP13.66□□□□□ -0.22
TRIM13-201ENST00000356017 FOXG1P55316 489 aaPredicted RBP13.66□□□□□ -0.22
TRIM13-201ENST00000356017 LCN6P62502 163 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 GABRA6Q16445 453 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 LRRC36Q1X8D7 754 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 NRN1LQ496H8 165 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 PTCHD4Q6ZW05 846 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 ZNF627Q7L945 461 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 IQCF1Q8N6M8 205 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 OR1K1Q8NGR3 316 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 ZNF837Q96EG3 531 aaPredicted RBP13.66□□□□□ -0.22
TRIM13-201ENST00000356017 SLC38A2Q96QD8 506 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 FOXB1Q99853 325 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 ACTR6Q9GZN1 396 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 SYT4Q9H2B2 425 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 VCXQ9H320 206 aa13.66□□□□□ -0.22
TRIM13-201ENST00000356017 NKX1-2Q9UD57 310 aaPredicted RBP13.66□□□□□ -0.22
TRIM13-201ENST00000356017 A1L4Q6 167 aa13.65□□□□□ -0.22
TRIM13-201ENST00000356017 IGFBP2P18065 325 aa13.65□□□□□ -0.22
TRIM13-201ENST00000356017 PEX2P28328 305 aa13.65□□□□□ -0.22
TRIM13-201ENST00000356017 CCKARP32238 428 aa13.65□□□□□ -0.22
TRIM13-201ENST00000356017 ARF1P84077 181 aaKnown RBP13.65□□□□□ -0.22
TRIM13-201ENST00000356017 FMODQ06828 376 aa13.65□□□□□ -0.22
TRIM13-201ENST00000356017 TIMM23BQ5SRD1 257 aa13.65□□□□□ -0.22
TRIM13-201ENST00000356017 ZNF362Q5T0B9 420 aaPredicted RBP13.65□□□□□ -0.22
TRIM13-201ENST00000356017 OGFRL1Q5TC84 451 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms