RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 SFXN1Q9H9B4 322 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 Q9N2J8 555 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 ZNF860A6NHJ4 632 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 NUDT19A8MXV4 375 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 PSMD9O00233 223 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 EML2O95834 649 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 CD74P04233 296 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 CD3DP04234 171 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 MPZP25189 248 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 RORAP35398 523 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 POU3F4P49335 361 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 STARP49675 285 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.36□□□□□ -0.75
CAPN9-202ENST00000354537 C2orf76Q3KRA6 126 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 ALG10Q5BKT4 473 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 VWA2Q5GFL6 755 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 ATRAIDQ6UW56 229 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 OR51D1Q8NGF3 324 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 ASB17Q8WXJ9 295 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 MARC2Q969Z3 335 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 TAS2R3Q9NYW6 316 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 ERVK-19Q9WJR5 959 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 BRCA2P51587 3418 aa10.36□□□□□ -0.75
CAPN9-202ENST00000354537 A6NCN8 305 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 OR5H14A6NHG9 310 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 DOK2O60496 412 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 KDM4BO94953 1096 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 RAB3DO95716 219 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 ASAH2BP0C7U1 165 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 HOXB1P14653 301 aaPredicted RBP10.35□□□□□ -0.75
CAPN9-202ENST00000354537 GRPRP30550 384 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 GJA4P35212 333 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 CTNNB1P35222 781 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 AQP2P41181 271 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 CAPZA1P52907 286 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 PLA2G7Q13093 441 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 ITPRIPL2Q3MIP1 535 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 EEF1A1P5Q5VTE0 462 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 LIN54Q6MZP7 749 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 C11orf87Q6NUJ2 197 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.35□□□□□ -0.75
CAPN9-202ENST00000354537 STEAP2Q8NFT2 490 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 DUSP19Q8WTR2 217 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 ATOH1Q92858 354 aaPredicted RBP10.35□□□□□ -0.75
CAPN9-202ENST00000354537 PTX4Q96A99 478 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 COMMD9Q9P000 198 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 PTPRSQ13332 1948 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 SNRNP200O75643 2136 aaKnown RBP10.35□□□□□ -0.75
CAPN9-202ENST00000354537 PRRC2BQ5JSZ5 2229 aaKnown RBP10.35□□□□□ -0.75
CAPN9-202ENST00000354537 ELOA3DA6NLF2 546 aaPredicted RBP10.35□□□□□ -0.75
CAPN9-202ENST00000354537 C2orf74A8MZ97 194 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 GNB5O14775 395 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 RENP00797 406 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 HOXA1P49639 335 aaPredicted RBP10.35□□□□□ -0.75
CAPN9-202ENST00000354537 EFNB2P52799 333 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 CTXN1P60606 82 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 IGLV3-21P80748 117 aaPredicted RBP10.35□□□□□ -0.75
CAPN9-202ENST00000354537 MC2RQ01718 297 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 RUNX3Q13761 415 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 FAM53BQ14153 422 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 ELOA3BQ3SY89 546 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 PAN3Q58A45 887 aaKnown RBP10.35□□□□□ -0.75
CAPN9-202ENST00000354537 SHEQ5VZ18 495 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 PSRC1Q6PGN9 363 aaPredicted RBP10.35□□□□□ -0.75
CAPN9-202ENST00000354537 DGAT2L6Q6ZPD8 337 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 ACOT7LQ6ZUV0 252 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 PRSS41Q7RTY9 318 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 ATG4DQ86TL0 474 aaPredicted RBP10.35□□□□□ -0.75
CAPN9-202ENST00000354537 PRSS35Q8N3Z0 413 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 RCBTB1Q8NDN9 531 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 ELOA3Q8NG57 546 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 OR4N2Q8NGD1 307 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 OR5T3Q8NGG3 340 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 FAM3CQ92520 227 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 SEH1LQ96EE3 360 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 ARSGQ96EG1 525 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 CHST6Q9GZX3 395 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 FKRPQ9H9S5 495 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 HPF1Q9NWY4 346 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 IKZF2Q9UKS7 526 aa10.35□□□□□ -0.75
CAPN9-202ENST00000354537 APBB3O95704 486 aa10.34□□□□□ -0.75
CAPN9-202ENST00000354537 APODP05090 189 aa10.34□□□□□ -0.75
CAPN9-202ENST00000354537 ACRP10323 421 aa10.34□□□□□ -0.75
CAPN9-202ENST00000354537 KIR3DL2P43630 455 aa10.34□□□□□ -0.75
CAPN9-202ENST00000354537 ADPRHP54922 357 aa10.34□□□□□ -0.75
CAPN9-202ENST00000354537 GUCA2AQ02747 115 aa10.34□□□□□ -0.75
CAPN9-202ENST00000354537 MEF2DQ14814 521 aa10.34□□□□□ -0.75
CAPN9-202ENST00000354537 KLHL26Q53HC5 615 aa10.34□□□□□ -0.75
CAPN9-202ENST00000354537 NPSR1Q6W5P4 371 aa10.34□□□□□ -0.75
CAPN9-202ENST00000354537 LSRQ86X29 649 aaPredicted RBP10.34□□□□□ -0.75
CAPN9-202ENST00000354537 TMEFF1Q8IYR6 380 aa10.34□□□□□ -0.75
CAPN9-202ENST00000354537 CSNK1A1LQ8N752 337 aa10.34□□□□□ -0.75
CAPN9-202ENST00000354537 BPIFCQ8NFQ6 507 aa10.34□□□□□ -0.75
CAPN9-202ENST00000354537 OR1E3Q8WZA6 343 aa10.34□□□□□ -0.75
CAPN9-202ENST00000354537 SLC25A28Q96A46 364 aa10.34□□□□□ -0.75
CAPN9-202ENST00000354537 ZNF587Q96SQ5 575 aaPredicted RBP10.34□□□□□ -0.75
CAPN9-202ENST00000354537 INTS14Q96SY0 518 aa10.34□□□□□ -0.75
CAPN9-202ENST00000354537 MMP25Q9NPA2 562 aa10.34□□□□□ -0.75
CAPN9-202ENST00000354537 SLC2A8Q9NY64 477 aa10.34□□□□□ -0.75
CAPN9-202ENST00000354537 GRHPRQ9UBQ7 328 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms