RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 ZNF879B4DU55 563 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 ERVH48-1M5A8F1 160 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 ITGA10O75578 1167 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 MPZL1O95297 269 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 IGHV3-9P01782 118 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 CD2P06729 351 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 IFNGR1P15260 489 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 RPS4Y1P22090 263 aaKnown RBP9.42□□□□□ -0.9
SMPD4-201ENST00000351288 MTNR1BP49286 362 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.42□□□□□ -0.9
SMPD4-201ENST00000351288 TMEM71Q6P5X7 295 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 LRRC28Q86X40 367 aaPredicted RBP9.42□□□□□ -0.9
SMPD4-201ENST00000351288 ZNF687Q8N1G0 1237 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 OR10G3Q8NGC4 313 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 CTHRC1Q96CG8 243 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 INTS14Q96SY0 518 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 SOSTQ9BQB4 213 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 CACNG6Q9BXT2 260 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 NTMQ9P121 344 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 SLC23A1Q9UHI7 598 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 COA3Q9Y2R0 106 aaPredicted RBP9.42□□□□□ -0.9
SMPD4-201ENST00000351288 A0A087WUJ7 227 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 PLPP2O43688 288 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 S100A1P23297 94 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 HSD11B1P28845 292 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 CLDN20P56880 219 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 CLRN1P58418 232 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 EBPQ15125 230 aaKnown RBP9.42□□□□□ -0.9
SMPD4-201ENST00000351288 TRILQ7L0X0 811 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 C9orf40Q8IXQ3 194 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 OR5L2Q8NGL0 311 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 NAT6Q93015 286 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 TMEM106AQ96A25 262 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 WDR89Q96FK6 387 aaPredicted RBP9.42□□□□□ -0.9
SMPD4-201ENST00000351288 MICU1Q9BPX6 476 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 RBM24Q9BX46 236 aaKnown RBP9.42□□□□□ -0.9
SMPD4-201ENST00000351288 OR10A4Q9H209 315 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 PLEKHA1Q9HB21 404 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 ZNF160Q9HCG1 818 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 ISYNA1Q9NPH2 558 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 ING3Q9NXR8 418 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 CKLFQ9UBR5 152 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 SLC22A13Q9Y226 551 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 GMDSO60547 372 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 GATBO75879 557 aaKnown RBP9.41□□□□□ -0.9
SMPD4-201ENST00000351288 ZFAND5O76080 213 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 ZFPL1O95159 310 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 SERPINA3P01011 423 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 FAM157BP0CG42 384 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 EPXP11678 715 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 EPHA8P29322 1005 aaPredicted RBP9.41□□□□□ -0.9
SMPD4-201ENST00000351288 UBE2MP61081 183 aaKnown RBP9.41□□□□□ -0.9
SMPD4-201ENST00000351288 SPOCK1Q08629 439 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 CCDC58Q4VC31 144 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 C1QTNF12Q5T7M4 302 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 YOD1Q5VVQ6 348 aaPredicted RBP9.41□□□□□ -0.9
SMPD4-201ENST00000351288 C1orf140Q5VVS0 124 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 OR11H7Q8NGC8 314 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 OR2AJ1Q8NGZ0 328 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 GNRHR2Q96P88 292 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 HPF1Q9NWY4 346 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 ST6GALNAC2Q9UJ37 374 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 RCE1Q9Y256 329 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 MMACHCQ9Y4U1 282 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 NSG1A0A0A6YYJ2 146 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 TEX46H3BTG2 121 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 SULT2B1O00204 365 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 PIN1P1O15428 100 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 H2BFMP0C1H6 154 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 SLC2A5P22732 501 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 BTCP35070 178 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 BIDP55957 195 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 PRSS12P56730 875 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 FOXK1P85037 733 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 CFHR1Q03591 330 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 LINC00696Q6ZRV3 163 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 MDGA2Q7Z553 956 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 CMTM4Q8IZR5 234 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 SLC39A7Q92504 469 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 AKAP1Q92667 903 aaKnown RBP eCLIP9.41□□□□□ -0.92e-7■■■■□ 20
SMPD4-201ENST00000351288 TRIM63Q969Q1 353 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 FAM71F1Q96KD3 344 aaPredicted RBP9.41□□□□□ -0.9
SMPD4-201ENST00000351288 SPACA5Q96QH8 159 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 F5H5K5 113 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 ZNF43P17038 809 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 ITGA3P26006 1051 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 TAS2R43P59537 309 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 DMKNQ6E0U4 476 aaPredicted RBP9.41□□□□□ -0.9
SMPD4-201ENST00000351288 ZNF101Q8IZC7 436 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 LRRC18Q8N456 261 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 OR11H4Q8NGC9 324 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 KCNJ15Q99712 375 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 MARVELD1Q9BSK0 173 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 NPAP1Q9NZP6 1156 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 VSX1Q9NZR4 365 aaPredicted RBP9.41□□□□□ -0.9
SMPD4-201ENST00000351288 CHRNA9Q9UGM1 479 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 MGAT4AQ9UM21 535 aa9.41□□□□□ -0.9
SMPD4-201ENST00000351288 FARSAQ9Y285 508 aaKnown RBP9.41□□□□□ -0.9
SMPD4-201ENST00000351288 A0A1W2PQM1 296 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 SLC19A2O60779 497 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms