RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 SNX29P2Q8IUI4 249 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 OR11G2Q8NGC1 345 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 OR6K6Q8NGW6 343 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 OR10Z1Q8NGY1 313 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 GRPEL2Q8TAA5 225 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 SPACA9Q96E40 222 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-202ENST00000345734 KCNS3Q9BQ31 491 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 STRADBQ9C0K7 418 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 METTL7AQ9H8H3 244 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 RPRD1BQ9NQG5 326 aaKnown RBP8.32□□□□□ -1.08
ATG4A-202ENST00000345734 INPP5EQ9NRR6 644 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 SNTG1Q9NSN8 517 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 BABAM2Q9NXR7 383 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 PPP4R1LQ9P1A2 415 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 SLC6A5Q9Y345 797 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 DMXL1Q9Y485 3027 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 J3QLW9 94 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 DCTN6O00399 190 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 SLC30A4O14863 429 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 TXNDC12O95881 172 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 PAHP00439 452 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 PLGP00747 810 aaPredicted RBP8.31□□□□□ -1.08
ATG4A-202ENST00000345734 THBDP07204 575 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 ZNF806P0C7X5 589 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 ZNF19P17023 458 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 DIO1P49895 249 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 OR12D2P58182 307 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 FOXF1Q12946 379 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 GGTLC2Q14390 218 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 PON3Q15166 354 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 C4orf46Q504U0 113 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 MAMDC2Q7Z304 686 aaPredicted RBP8.31□□□□□ -1.08
ATG4A-202ENST00000345734 KCTD20Q7Z5Y7 419 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 SLC35F2Q8IXU6 374 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 ARIH2OSQ8N7S6 290 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 EXD3Q8N9H8 876 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 CT55Q8WUE5 264 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 TMEM234Q8WY98 164 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 ST8SIA1Q92185 356 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 C4orf36Q96KX1 117 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 CNN2Q99439 309 aaKnown RBP8.31□□□□□ -1.08
ATG4A-202ENST00000345734 EDEM2Q9BV94 578 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 HDHD5Q9BXW7 423 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 ZNF160Q9HCG1 818 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 HMG20AQ9NP66 347 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 GRHPRQ9UBQ7 328 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 NUP50Q9UKX7 468 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 PADI1Q9ULC6 663 aa8.31□□□□□ -1.08
ATG4A-202ENST00000345734 SMIM30A4D0T7 59 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 CD8B2A6NJW9 211 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 DVL2O14641 736 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 MT-ATP6P00846 226 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 CD8BP10966 210 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 APEHP13798 732 aaKnown RBP8.3□□□□□ -1.08
ATG4A-202ENST00000345734 AHCYP23526 432 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 SOX6P35712 828 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 HTR3AP46098 478 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 LGALS3BPQ08380 585 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 KRR1Q13601 381 aaKnown RBP8.3□□□□□ -1.08
ATG4A-202ENST00000345734 EXT1Q16394 746 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 FAM69AQ5T7M9 428 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 LINC01590Q5TEZ4 76 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 LCN1P1Q5VSP4 162 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 PRAMEF20Q5VT98 475 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 CD200R1LQ6Q8B3 271 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 IL20RBQ6UXL0 311 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 RPTNQ6XPR3 784 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 OR5M1Q8NGP8 315 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 OR5J2Q8NH18 312 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 S100ZQ8WXG8 99 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 TXNDC15Q96J42 360 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 ARL5BQ96KC2 179 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 TAAR9Q96RI9 348 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 ALG12Q9BV10 488 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 WDR12Q9GZL7 423 aaKnown RBP8.3□□□□□ -1.08
ATG4A-202ENST00000345734 NUAK2Q9H093 628 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 FBXL2Q9UKC9 423 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 POU2F3Q9UKI9 436 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 COPS3Q9UNS2 423 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 WIF1Q9Y5W5 379 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 A3GALT2U3KPV4 340 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 PCSK5Q92824 1860 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 NSG1A0A0A6YYJ2 146 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 TRDV1A0A1B0GX56 115 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 FTCDNL1E5RQL4 147 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 GABRPO00591 440 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 CTDSP2O14595 271 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 RNF13O43567 381 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 EFNA2O43921 213 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 GLCEO94923 617 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 AHSA1O95433 338 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 MT-ND5P03915 603 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 TCN2P20062 427 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 OTX2P32243 289 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 SDC2P34741 201 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 CASP3P42574 277 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 CENPAP49450 140 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 SLC25A1P53007 311 aa8.3□□□□□ -1.08
ATG4A-202ENST00000345734 AP2S1P53680 142 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms