RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 VSX1Q9NZR4 365 aaPredicted RBP17.95■□□□□ 0.46
HDAC4-201ENST00000345617 SORBS2O94875 1100 aaKnown RBP17.95■□□□□ 0.46
HDAC4-201ENST00000345617 CBX7O95931 251 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 TIMP2P16035 220 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 EIF1P41567 113 aaKnown RBP17.95■□□□□ 0.46
HDAC4-201ENST00000345617 C15orf39Q6ZRI6 1047 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 ARHGAP9Q9BRR9 750 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 SELENOIQ9C0D9 397 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 STC2O76061 302 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 M0QZK8 103 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 GGCTO75223 188 aaKnown RBP17.95■□□□□ 0.46
HDAC4-201ENST00000345617 SLC5A12Q1EHB4 618 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 CADM3Q8N126 398 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 PGBD5Q8N414 524 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 CISD2Q8N5K1 135 aaKnown RBP17.95■□□□□ 0.46
HDAC4-201ENST00000345617 OR11L1Q8NGX0 322 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 NSG2Q9Y328 171 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 LRRC30A6NM36 301 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 TFAP2AP05549 437 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 CHRM4P08173 479 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 ELAVL4P26378 380 aaKnown RBP17.95■□□□□ 0.46
HDAC4-201ENST00000345617 ZNF85Q03923 595 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 PMPCAQ10713 525 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 CELF2-AS1Q8N7Q2 184 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 TCTN2Q96GX1 697 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 GNG12Q9UBI6 72 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 NCR1O76036 304 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 POU3F1Q03052 451 aaPredicted RBP17.95■□□□□ 0.46
HDAC4-201ENST00000345617 IKZF1Q13422 519 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 TCRBV21S2A2A0A5A6 115 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 OR7C1O76099 320 aaPredicted RBP17.94■□□□□ 0.46
HDAC4-201ENST00000345617 GASTP01350 101 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 HNRNPA2B1P22626 353 aaKnown RBP17.94■□□□□ 0.46
HDAC4-201ENST00000345617 DPPA4Q7L190 304 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 TMEM217Q8N7C4 229 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 GALNT9Q9HCQ5 603 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 ZXDBP98169 803 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 OR7E24Q6IFN5 339 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 HMGN2P46Q86SG4 172 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 JAM3Q9BX67 310 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 CACNG4Q9UBN1 327 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 TMEM184BQ9Y519 407 aaPredicted RBP17.94■□□□□ 0.46
HDAC4-201ENST00000345617 A0A1W2PP55 124 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 LIPCP11150 499 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 GCSHP23434 173 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 CST6Q15828 149 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 SLC38A5Q8WUX1 472 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 MOCOSQ96EN8 888 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 LIN7CQ9NUP9 197 aaKnown RBP17.94■□□□□ 0.46
HDAC4-201ENST00000345617 POU3F2P20265 443 aaPredicted RBP17.94■□□□□ 0.46
HDAC4-201ENST00000345617 H0YIV9 168 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 CPNE6O95741 557 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 MT-ATP6P00846 226 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 ZNF280AP59817 542 aaPredicted RBP17.94■□□□□ 0.46
HDAC4-201ENST00000345617 ZBTB37Q5TC79 503 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 HSD17B11Q8NBQ5 300 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 SSUH2Q9Y2M2 353 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 ATAD5Q96QE3 1844 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 RAB13P51153 203 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 FAM57BQ71RH2 274 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 BOKQ9UMX3 212 aaPredicted RBP17.94■□□□□ 0.46
HDAC4-201ENST00000345617 ABLIM2Q6H8Q1 611 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 OBP2BQ9NPH6 170 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 TRAPPC2LQ9UL33 140 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 PADI1Q9ULC6 663 aa17.94■□□□□ 0.46
HDAC4-201ENST00000345617 SNRPBP14678 240 aaKnown RBP17.93■□□□□ 0.46
HDAC4-201ENST00000345617 PRLHRP49683 370 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 KIAA1024LP59773 190 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 PPP1R3BQ86XI6 285 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 IGSF8Q969P0 613 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 CXorf58Q96LI9 332 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 CDCA4Q9BXL8 241 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 OR10J4P0C629 311 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 EVX2Q03828 476 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 IL20RBQ6UXL0 311 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 SLC35B4Q969S0 331 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 RTP3Q9BQQ7 232 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 ARNT2Q9HBZ2 717 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 H3BQ06 376 aaPredicted RBP17.93■□□□□ 0.46
HDAC4-201ENST00000345617 DEFA4P12838 97 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 HOXC13P31276 330 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 ATP13A2Q9NQ11 1180 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 MRPS28Q9Y2Q9 187 aaKnown RBP17.93■□□□□ 0.46
HDAC4-201ENST00000345617 CSAG2Q9Y5P2 127 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 A0A0A6YYJ9 748 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 FAM171A2A8MVW0 826 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 CCR6P51684 374 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 ZNF154Q13106 437 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 MPPED2Q15777 294 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 ACSM4P0C7M7 580 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 CBR1P16152 277 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 GLYATL3Q5SZD4 288 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 OR52I1Q8NGK6 324 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 APH1AQ96BI3 265 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 RAB18Q9NP72 206 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 C1orf105O95561 183 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 FBP1P09467 338 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 SQSTM1Q13501 440 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.93■□□□□ 0.46
HDAC4-201ENST00000345617 GRASPQ7Z6J2 395 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms