RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 HIST3H2AQ7L7L0 130 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 PRSS45Q7RTY3 260 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 FAM220AQ7Z4H9 259 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 KCTD20Q7Z5Y7 419 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 HIST1H2ACQ93077 130 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 DPAGT1Q9H3H5 408 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 NIPAL2Q9H841 368 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 AKIRIN1Q9H9L7 192 aaPredicted RBP13.55□□□□□ -0.24
TPM3-208ENST00000341485 NUDT15Q9NV35 164 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 ING3Q9NXR8 418 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 NXT1Q9UKK6 140 aaKnown RBP13.55□□□□□ -0.24
TPM3-208ENST00000341485 COL27A1Q8IZC6 1860 aaPredicted RBP13.55□□□□□ -0.24
TPM3-208ENST00000341485 TRAV6A0A075B6T7 132 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 A0A1W2PQD3 144 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 AIPO00170 330 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 CTDSPLO15194 276 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 NDUFB5O43674 189 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 GSTZ1O43708 216 aaPredicted RBP13.55□□□□□ -0.24
TPM3-208ENST00000341485 GPANK1O95872 356 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 TACSTD2P09758 323 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 S100A1P23297 94 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 CXCR1P25024 350 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 ERP29P30040 261 aaKnown RBP13.55□□□□□ -0.24
TPM3-208ENST00000341485 MRPL28Q13084 256 aaKnown RBP13.55□□□□□ -0.24
TPM3-208ENST00000341485 GPR139Q6DWJ6 353 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 MTFR2Q6P444 385 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 RAB11FIP2Q7L804 512 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 ZNF433Q8N7K0 673 aaPredicted RBP13.55□□□□□ -0.24
TPM3-208ENST00000341485 OR2T4Q8NH00 348 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 ZFAND1Q8TCF1 268 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 ADAMTS14Q8WXS8 1223 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 SLC25A38Q96DW6 304 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 OMA1Q96E52 524 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 CMTM3Q96MX0 182 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 NDEL1Q9GZM8 345 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 WDR76Q9H967 626 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 TAS2R5Q9NYW4 299 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 FRRS1LQ9P0K9 344 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 TRAV36DV7A0A075B6V5 113 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 A0A1B0GTH9 108 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 SMLR1H3BR10 107 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 EIF4E2O60573 245 aaKnown RBP13.54□□□□□ -0.24
TPM3-208ENST00000341485 ITGA10O75578 1167 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 RENP00797 406 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 TCRBP04435 133 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 JMJD7P0C870 316 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 PRKCAP17252 672 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 DPP4P27487 766 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 CLDN6P56747 220 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 MAB21L1Q13394 359 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 EEF1A1P5Q5VTE0 462 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 PAPD4Q6PIY7 484 aaKnown RBP13.54□□□□□ -0.24
TPM3-208ENST00000341485 CPEB2Q7Z5Q1 589 aaKnown RBP13.54□□□□□ -0.24
TPM3-208ENST00000341485 OR6N2Q8NGY6 317 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 SCMH1Q96GD3 660 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 PTDSS2Q9BVG9 487 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 SYT4Q9H2B2 425 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 SLA2Q9H6Q3 261 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 AUNIPQ9H7T9 357 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 WDR54Q9H977 334 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 LAMP5Q9UJQ1 280 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 NUBP2Q9Y5Y2 271 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 B3GALT1Q9Y5Z6 326 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 C7orf66A4D0T2 115 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 C11orf98E9PRG8 122 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 CDC40O60508 579 aaKnown RBP eCLIP13.54□□□□□ -0.24
TPM3-208ENST00000341485 CYC1P08574 325 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 GIFP27352 417 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 ABCD3P28288 659 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 RPS27P42677 84 aaKnown RBP13.54□□□□□ -0.24
TPM3-208ENST00000341485 KLF9Q13886 244 aaPredicted RBP13.54□□□□□ -0.24
TPM3-208ENST00000341485 FCN2Q15485 313 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 STPG1Q5TH74 334 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 PM20D2Q8IYS1 436 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 ZNF441Q8N8Z8 693 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 OR5AK2Q8NH90 309 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 SMIM4Q8WVI0 70 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 TBL1XR1Q9BZK7 514 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 PISDQ9UG56 409 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 V9GY05 133 aa13.54□□□□□ -0.24
TPM3-208ENST00000341485 TTC28Q96AY4 2481 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 TRBV5-5A0A0J9YX44 114 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 TEX51A0A1B0GUA7 166 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 ARHGEF9O43307 516 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 SCO2O43819 266 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 NUDT14O95848 222 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 DHFRP00374 187 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 GP1BBP13224 206 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 PGCP20142 388 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 ALOX5APP20292 161 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 CLDN12P56749 244 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 TCF15Q12870 199 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 TNK1Q13470 666 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 Q499Y3 187 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 FCRLAQ7L513 359 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 DPY19L4Q7Z388 723 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 PRSS33Q8NF86 280 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 LILRB4Q8NHJ6 448 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 KLHL15Q96M94 604 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 MESP1Q9BRJ9 268 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms