RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 IKZF2Q9UKS7 526 aa20.09■□□□□ 0.81
PDLIM2-203ENST00000339162 IGKV1D-43A0A0B4J1Z2 117 aa20.08■□□□□ 0.81
PDLIM2-203ENST00000339162 OR2M5A3KFT3 312 aa20.08■□□□□ 0.81
PDLIM2-203ENST00000339162 DAP3P51398 398 aaKnown RBP20.08■□□□□ 0.81
PDLIM2-203ENST00000339162 BIDP55957 195 aa20.08■□□□□ 0.81
PDLIM2-203ENST00000339162 TGIF1Q15583 401 aa20.08■□□□□ 0.81
PDLIM2-203ENST00000339162 CCDC190Q86UF4 302 aa20.08■□□□□ 0.81
PDLIM2-203ENST00000339162 NR2C2APQ86WQ0 139 aa20.08■□□□□ 0.81
PDLIM2-203ENST00000339162 RNF166Q96A37 237 aaPredicted RBP20.08■□□□□ 0.81
PDLIM2-203ENST00000339162 KLHL15Q96M94 604 aa20.08■□□□□ 0.81
PDLIM2-203ENST00000339162 ZFHX2Q9C0A1 2572 aaPredicted RBP20.08■□□□□ 0.81
PDLIM2-203ENST00000339162 IQCMA0A1B0GVH7 501 aa20.08■□□□□ 0.8
PDLIM2-203ENST00000339162 PFDN1O60925 122 aa20.08■□□□□ 0.8
PDLIM2-203ENST00000339162 ALOX5APP20292 161 aa20.08■□□□□ 0.8
PDLIM2-203ENST00000339162 P2RY4P51582 365 aa20.08■□□□□ 0.8
PDLIM2-203ENST00000339162 SPANXN2Q5MJ10 180 aa20.08■□□□□ 0.8
PDLIM2-203ENST00000339162 SPINK14Q6IE38 97 aa20.08■□□□□ 0.8
PDLIM2-203ENST00000339162 RPL22L1Q6P5R6 122 aaKnown RBP20.08■□□□□ 0.8
PDLIM2-203ENST00000339162 YIPF7Q8N8F6 280 aa20.08■□□□□ 0.8
PDLIM2-203ENST00000339162 ABCB9Q9NP78 766 aa20.08■□□□□ 0.8
PDLIM2-203ENST00000339162 ABCB10Q9NRK6 738 aa20.08■□□□□ 0.8
PDLIM2-203ENST00000339162 B3GNT3Q9Y2A9 372 aa20.08■□□□□ 0.8
PDLIM2-203ENST00000339162 CNOT1A5YKK6 2376 aaKnown RBP20.08■□□□□ 0.8
PDLIM2-203ENST00000339162 A0A087WZY1 265 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 A0A1B0GTH9 108 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 SULT2B1O00204 365 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 TNFRSF10AO00220 468 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 TBX1O43435 398 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 SNX4O95219 450 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 GALP22466 123 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 CD40LGP29965 261 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 CAPZA2P47755 286 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 CYB561P49447 251 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 GABREP78334 506 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 LIPNQ5VXI9 398 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 SPATC1Q76KD6 591 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 NKD1Q969G9 470 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 MRPL48Q96GC5 212 aaKnown RBP20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 SNX18Q96RF0 628 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 KCNK17Q96T54 332 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 RNF32Q9H0A6 362 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 DEPPQ9NTK1 212 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 FREM3P0C091 2139 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 TAF4O00268 1085 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 CBR3O75828 277 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 SC5DO75845 299 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 SPARCP09486 303 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 RFPL3SP0C7P2 107 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 CD53P19397 219 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 MADCAM1Q13477 382 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 DCAF10Q5QP82 559 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 TMEM225Q6GV28 225 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 ADAMTS17Q8TE56 1095 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 SLC25A43Q8WUT9 341 aaPredicted RBP20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 SACM1LQ9NTJ5 587 aa20.07■□□□□ 0.8
PDLIM2-203ENST00000339162 ZNF292O60281 2723 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 A6NIZ1 184 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 ITGA3P26006 1051 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 MAGEB1P43366 347 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 RAP1BP61224 184 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 RPS11P62280 158 aaKnown RBP eCLIP20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 RAP1AP62834 184 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 ADAM8P78325 824 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 ZNF45Q02386 682 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 YRDCQ86U90 279 aaKnown RBP20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 RAB43Q86YS6 212 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 MS4A15Q8N5U1 240 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 FAM83FQ8NEG4 500 aaPredicted RBP20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 OTOSQ8NHW6 89 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 TMEM41AQ96HV5 264 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 SLC30A2Q9BRI3 323 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 MIXL1Q9H2W2 232 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 COMMD3Q9UBI1 195 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 CMAHPQ9Y471 501 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 RIF1Q5UIP0 2472 aaKnown RBP20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 A0A1W2PNV4 684 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 UPK3AO75631 287 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 SULT1C4O75897 302 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 KRT8P05787 483 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 RGS21Q2M5E4 152 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 ATP1A1-AS1Q5TC04 95 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 TMPPEQ6ZT21 453 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 FAM220AQ7Z4H9 259 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 SYT9Q86SS6 491 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 UEVLDQ8IX04 471 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 PPP1R14BQ96C90 147 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 OR14A2Q96R54 314 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 POLE4Q9NR33 117 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 SLCO1C1Q9NYB5 712 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 HDGFL3Q9Y3E1 203 aa20.06■□□□□ 0.8
PDLIM2-203ENST00000339162 H0YC42 278 aa20.05■□□□□ 0.8
PDLIM2-203ENST00000339162 ABHD16AO95870 558 aa20.05■□□□□ 0.8
PDLIM2-203ENST00000339162 CRABP1P29762 137 aa20.05■□□□□ 0.8
PDLIM2-203ENST00000339162 OR10A3P58181 314 aa20.05■□□□□ 0.8
PDLIM2-203ENST00000339162 CAMK2DQ13557 499 aa20.05■□□□□ 0.8
PDLIM2-203ENST00000339162 TRAM1Q15629 374 aa20.05■□□□□ 0.8
PDLIM2-203ENST00000339162 CCDC58Q4VC31 144 aa20.05■□□□□ 0.8
PDLIM2-203ENST00000339162 TUBA3EQ6PEY2 450 aa20.05■□□□□ 0.8
PDLIM2-203ENST00000339162 NHLRC1Q6VVB1 395 aa20.05■□□□□ 0.8
PDLIM2-203ENST00000339162 NSMAFQ92636 917 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms