RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 DGAT2Q96PD7 388 aa9.78□□□□□ -0.84
RTN3-201ENST00000338850 BRD7Q9NPI1 651 aa9.78□□□□□ -0.84
RTN3-201ENST00000338850 PRTFDC1Q9NRG1 225 aa9.78□□□□□ -0.84
RTN3-201ENST00000338850 EPHA6Q9UF33 1036 aa9.78□□□□□ -0.84
RTN3-201ENST00000338850 PISDQ9UG56 409 aa9.78□□□□□ -0.84
RTN3-201ENST00000338850 LOXL2Q9Y4K0 774 aa9.78□□□□□ -0.84
RTN3-201ENST00000338850 IER3IP1Q9Y5U9 82 aa9.78□□□□□ -0.84
RTN3-201ENST00000338850 V9GY05 133 aa9.78□□□□□ -0.84
RTN3-201ENST00000338850 CPAMD8Q8IZJ3 1885 aa9.78□□□□□ -0.84
RTN3-201ENST00000338850 IGKV1D-42A0A075B6H8 117 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 TRBV5-7A0A0A0MS05 114 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 A0A1W2PQD3 144 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 ANKRD20A5PA0PJZ0 165 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 PIN1P1O15428 100 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 EFSO43281 561 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 ZNF254O75437 659 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 KRT33AO76009 404 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 SLC22A5O76082 557 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 IL33O95760 270 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 IFNA7P01567 189 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 MELTFP08582 738 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 ASAH2BP0C7U1 165 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 JMJD7P0C870 316 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 SNRPBP14678 240 aaKnown RBP9.77□□□□□ -0.85
RTN3-201ENST00000338850 PSMB1P20618 241 aaKnown RBP9.77□□□□□ -0.85
RTN3-201ENST00000338850 OR3A3P47888 321 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 GABRA4P48169 554 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 ARPC4P59998 168 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 DCAF7P61962 342 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 STX4Q12846 297 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 CAMK2DQ13557 499 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 TCTE1Q5JU00 501 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 CLLU1Q5K131 121 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 TEX261Q6UWH6 196 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 RPTNQ6XPR3 784 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 KRT74Q7RTS7 529 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 CDC20BQ86Y33 519 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 BCORP1Q8N888 145 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 OR2T4Q8NH00 348 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 ZNF417Q8TAU3 575 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 ZNF671Q8TAW3 534 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 GPR148Q8TDV2 347 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 ZDHHC1Q8WTX9 485 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 GIMAP1Q8WWP7 306 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 RNF166Q96A37 237 aaPredicted RBP9.77□□□□□ -0.85
RTN3-201ENST00000338850 OR14A2Q96R54 314 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 ALG12Q9BV10 488 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 RAB33BQ9H082 229 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 C20orf85Q9H1P6 137 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 HEXA-AS1Q9H8Q6 139 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 FKRPQ9H9S5 495 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 MMP25Q9NPA2 562 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 NPDC1Q9NQX5 325 aaPredicted RBP9.77□□□□□ -0.85
RTN3-201ENST00000338850 UBQLN4Q9NRR5 601 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 TAS2R8Q9NYW2 309 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 GNG8Q9UK08 70 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 FBXL4Q9UKA2 621 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 MRTO4Q9UKD2 239 aaKnown RBP9.77□□□□□ -0.85
RTN3-201ENST00000338850 COPS3Q9UNS2 423 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 U3KQ87 197 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 PIEZO2Q9H5I5 2752 aa9.77□□□□□ -0.85
RTN3-201ENST00000338850 FLNBO75369 2602 aaKnown RBP9.77□□□□□ -0.85
RTN3-201ENST00000338850 ATMQ13315 3056 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 UNC13CQ8NB66 2214 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 MPDZO75970 2070 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 OR6C68A6NDL8 312 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 A6NL46 340 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 TMEM212A6NML5 194 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 RHPN2P1A8MT19 583 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 TGFBR3LH3BV60 316 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 AGRPO00253 132 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 NOS1APO75052 506 aaPredicted RBP9.76□□□□□ -0.85
RTN3-201ENST00000338850 UPK3AO75631 287 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 CLPSP04118 112 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 GIPP09681 153 aaPredicted RBP9.76□□□□□ -0.85
RTN3-201ENST00000338850 CD3GP09693 182 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 CD37P11049 281 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 UBL4AP11441 157 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 PLA2G2AP14555 144 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 PVRP15151 417 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 IFNGR1P15260 489 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 ST6GAL1P15907 406 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 GIFP27352 417 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 FAUP35544 74 aaKnown RBP9.76□□□□□ -0.85
RTN3-201ENST00000338850 RPL4P36578 427 aaKnown RBP9.76□□□□□ -0.85
RTN3-201ENST00000338850 PPICP45877 212 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 OR1D5P58170 312 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 HHEXQ03014 270 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 RASGEF1BQ0VAM2 473 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 SKP2Q13309 424 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 ALKBH1Q13686 389 aaKnown RBP9.76□□□□□ -0.85
RTN3-201ENST00000338850 LY6DQ14210 128 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 TGIF1Q15583 401 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 PHF19Q5T6S3 580 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 PWWP2BQ6NUJ5 590 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 C5orf46Q6UWT4 87 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 DGAT2L6Q6ZPD8 337 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 JAZF1Q86VZ6 243 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 MCATQ8IVS2 390 aaKnown RBP9.76□□□□□ -0.85
RTN3-201ENST00000338850 CCDC28AQ8IWP9 274 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms