RNA–Protein interactions for RNA: ENST00000336292.10

SYNM-202, Transcript of synemin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNM, Length 7,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-202ENST00000336292 CCDC187A0A096LP49 1063 aa16.54■□□□□ 0.24
SYNM-202ENST00000336292 NSA2O95478 260 aaKnown RBP16.54■□□□□ 0.24
SYNM-202ENST00000336292 APOA2P02652 100 aa16.54■□□□□ 0.24
SYNM-202ENST00000336292 APOC3P02656 99 aa16.54■□□□□ 0.24
SYNM-202ENST00000336292 SDHBP21912 280 aa16.54■□□□□ 0.24
SYNM-202ENST00000336292 HOXD11P31277 338 aaPredicted RBP16.54■□□□□ 0.24
SYNM-202ENST00000336292 EIF1P41567 113 aaKnown RBP16.54■□□□□ 0.24
SYNM-202ENST00000336292 MSMO1Q15800 293 aa16.54■□□□□ 0.24
SYNM-202ENST00000336292 CPPED1Q9BRF8 314 aaPredicted RBP16.54■□□□□ 0.24
SYNM-202ENST00000336292 CHST6Q9GZX3 395 aa16.54■□□□□ 0.24
SYNM-202ENST00000336292 KIR3DX1Q9H7L2 352 aa16.54■□□□□ 0.24
SYNM-202ENST00000336292 WDR37Q9Y2I8 494 aa16.54■□□□□ 0.24
SYNM-202ENST00000336292 ZNF705FA8MVS1 300 aaPredicted RBP16.53■□□□□ 0.24
SYNM-202ENST00000336292 IGHV3-13P01766 116 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 IGHV3-7P01780 117 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 ZNF705DP0CH99 300 aaPredicted RBP16.53■□□□□ 0.24
SYNM-202ENST00000336292 ZNF705BP0CI00 300 aaPredicted RBP16.53■□□□□ 0.24
SYNM-202ENST00000336292 UPRTQ96BW1 309 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 NMNAT2Q9BZQ4 307 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 SLC31A2O15432 143 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 MT-CO3P00414 261 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 MEP1BQ16820 701 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 C1orf140Q5VVS0 124 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 Q6ZTK2 550 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 ZDHHC5Q9C0B5 715 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 BARX1Q9HBU1 254 aaPredicted RBP16.53■□□□□ 0.24
SYNM-202ENST00000336292 RPS10P5Q9NQ39 176 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 A0A1W2PPC4 97 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 A8MVM7 634 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 CTNSO60931 367 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 HLA-AP01891 365 aaKnown RBP16.53■□□□□ 0.24
SYNM-202ENST00000336292 SLC16A11Q8NCK7 471 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 FUNDC2Q9BWH2 189 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 TAS2R8Q9NYW2 309 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 A0A1B0GWA3 101 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 CATR1Q13166 79 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 TCTN3Q6NUS6 607 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 C17orf113A0A1B0GUU1 675 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 GFYI3L273 518 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 CAMK2BQ13554 666 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 SNAPC3Q92966 411 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 MRI1Q9BV20 369 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 AMBRA1Q9C0C7 1298 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 HRH4Q9H3N8 390 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 CPNE5Q9HCH3 593 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 CGGBP1Q9UFW8 167 aaPredicted RBP16.53■□□□□ 0.24
SYNM-202ENST00000336292 GLCEO94923 617 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 C3AR1Q16581 482 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 TMEM196Q5HYL7 178 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 WIPI1Q5MNZ9 446 aaPredicted RBP16.53■□□□□ 0.24
SYNM-202ENST00000336292 METRNLQ641Q3 311 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 OR4M1Q8NGD0 313 aa16.53■□□□□ 0.24
SYNM-202ENST00000336292 YTHDF1Q9BYJ9 559 aaKnown RBP16.53■□□□□ 0.24
SYNM-202ENST00000336292 PTBP2Q9UKA9 531 aaKnown RBP16.53■□□□□ 0.24
SYNM-202ENST00000336292 TRGV5A0A0B4J1U4 118 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 FZD7O75084 574 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 GABRG2P18507 467 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 CSNK1DP48730 415 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 NFATC3Q12968 1075 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 MFSD12Q6NUT3 480 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 BCORP1Q8N888 145 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 OR14A2Q96R54 314 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 SLC23A1Q9UHI7 598 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 PRELID3BQ9Y3B1 194 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 IGKV3-7A0A075B6H7 116 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 EIF3FO00303 357 aaPredicted RBP16.52■□□□□ 0.24
SYNM-202ENST00000336292 METAP1P53582 386 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 REEP5Q00765 189 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 RIPPLY1Q0D2K3 151 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 CLINT1Q14677 625 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 ADGRG5Q8IZF4 528 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 ARRDC2Q8TBH0 407 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 KHSRPQ92945 711 aaKnown RBP eCLIP16.52■□□□□ 0.24
SYNM-202ENST00000336292 NPTNQ9Y639 398 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 CENPBD1B2RD01 187 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 CDAP32320 146 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 METAP1DQ6UB28 335 aaPredicted RBP16.52■□□□□ 0.24
SYNM-202ENST00000336292 APOOLQ6UXV4 268 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 OR2T11Q8NH01 316 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 ACOT13Q9NPJ3 140 aa16.52■□□□□ 0.24
SYNM-202ENST00000336292 LRIT2A6NDA9 550 aa16.52■□□□□ 0.23
SYNM-202ENST00000336292 RNF212BA8MTL3 300 aa16.52■□□□□ 0.23
SYNM-202ENST00000336292 M0R082 166 aa16.52■□□□□ 0.23
SYNM-202ENST00000336292 ZNF205O95201 554 aa16.52■□□□□ 0.23
SYNM-202ENST00000336292 CPZQ66K79 652 aa16.52■□□□□ 0.23
SYNM-202ENST00000336292 ADGRF3Q8IZF5 1079 aa16.52■□□□□ 0.23
SYNM-202ENST00000336292 CISD2Q8N5K1 135 aaKnown RBP16.52■□□□□ 0.23
SYNM-202ENST00000336292 ZNF587Q96SQ5 575 aaPredicted RBP16.52■□□□□ 0.23
SYNM-202ENST00000336292 LRRC61Q9BV99 259 aa16.52■□□□□ 0.23
SYNM-202ENST00000336292 NIPAL2Q9H841 368 aa16.52■□□□□ 0.23
SYNM-202ENST00000336292 DOCK5Q9H7D0 1870 aa16.52■□□□□ 0.23
SYNM-202ENST00000336292 LAMA4Q16363 1823 aa16.52■□□□□ 0.23
SYNM-202ENST00000336292 IVDP26440 423 aa16.52■□□□□ 0.23
SYNM-202ENST00000336292 INSM1Q01101 510 aaPredicted RBP16.52■□□□□ 0.23
SYNM-202ENST00000336292 RAB35Q15286 201 aa16.52■□□□□ 0.23
SYNM-202ENST00000336292 TMEM52BQ4KMG9 183 aa16.52■□□□□ 0.23
SYNM-202ENST00000336292 NAXDQ8IW45 347 aa16.52■□□□□ 0.23
SYNM-202ENST00000336292 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.52■□□□□ 0.23
SYNM-202ENST00000336292 MEIKINA0A087WXM9 373 aa16.52■□□□□ 0.23
SYNM-202ENST00000336292 MSTNO14793 375 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms