RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 MUS81Q96NY9 551 aa12.12□□□□□ -0.47
TUBA1B-202ENST00000336023 RBP7Q96R05 134 aa12.12□□□□□ -0.47
TUBA1B-202ENST00000336023 SNX18Q96RF0 628 aa12.12□□□□□ -0.47
TUBA1B-202ENST00000336023 IL4I1Q96RQ9 567 aa12.12□□□□□ -0.47
TUBA1B-202ENST00000336023 SYT4Q9H2B2 425 aa12.12□□□□□ -0.47
TUBA1B-202ENST00000336023 SLC7A10Q9NS82 523 aa12.12□□□□□ -0.47
TUBA1B-202ENST00000336023 PRSS50Q9UI38 385 aa12.12□□□□□ -0.47
TUBA1B-202ENST00000336023 RNF6Q9Y252 685 aa12.12□□□□□ -0.47
TUBA1B-202ENST00000336023 FLNCQ14315 2725 aa12.12□□□□□ -0.47
TUBA1B-202ENST00000336023 INTS1Q8N201 2190 aaKnown RBP12.12□□□□□ -0.47
TUBA1B-202ENST00000336023 FAM183AA6NL82 134 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 DVL2O14641 736 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 SMNDC1O75940 238 aaKnown RBP eCLIP12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 KRT33AO76009 404 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 CD8BP10966 210 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 ADORA2A-AS1P86434 159 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 DBPQ10586 325 aaPredicted RBP12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 THEM4Q5T1C6 240 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 ZNF691Q5VV52 312 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 MTFR2Q6P444 385 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 LRFN4Q6PJG9 635 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 LIX1LQ8IVB5 337 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 DEPDC4Q8N2C3 294 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 UBE2J2Q8N2K1 259 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 OR8J1Q8NGP2 316 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 TRUB1Q8WWH5 349 aaKnown RBP12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 MCHR2Q969V1 340 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 OTULINQ96BN8 352 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 NMD3Q96D46 503 aaKnown RBP12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 TSSK2Q96PF2 358 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 APOL4Q9BPW4 351 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 LINC00470Q9BZP3 86 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 OPN3Q9H1Y3 402 aaPredicted RBP12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 RPRD1BQ9NQG5 326 aaKnown RBP12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 ZNF226Q9NYT6 803 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 UPB1Q9UBR1 384 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 ERRFI1Q9UJM3 462 aaPredicted RBP12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 PHF3Q92576 2039 aaKnown RBP12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 DIDO1Q9BTC0 2240 aaKnown RBP12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 QDPRP09417 244 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 NR2C1P13056 603 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 PAICSP22234 425 aaKnown RBP12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 FMODQ06828 376 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 IL18R1Q13478 541 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 FBXW9Q5XUX1 488 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 PLBD1Q6P4A8 553 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 USP51Q70EK9 711 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 CPOQ8IVL8 374 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 ZNF610Q8N9Z0 462 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 TMEM163Q8TC26 289 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 FNDC8Q8TC99 324 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 PTP4A1Q93096 173 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 ALKBH3Q96Q83 286 aaPredicted RBP12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 ULBP2Q9BZM5 246 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 NUAK2Q9H093 628 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 FN3KQ9H479 309 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 MED20Q9H944 212 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 SRA1Q9HD15 236 aaKnown RBP12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 B3GAT2Q9NPZ5 323 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 HINT3Q9NQE9 182 aaKnown RBP12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 RASSF1Q9NS23 344 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 RAB26Q9ULW5 256 aa12.11□□□□□ -0.47
TUBA1B-202ENST00000336023 ARHGAP21Q5T5U3 1957 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 IGKV1D-43A0A0B4J1Z2 117 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 PRR23D1E9PI22 279 aaPredicted RBP12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 PYCARD-AS1I3L0S3 204 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 DCTN6O00399 190 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 SLC16A7O60669 478 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 PRR23D2P0DMB1 279 aaPredicted RBP12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 CTLA4P16410 223 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 CHRNB4P30926 498 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 SNRPGP62308 76 aaKnown RBP12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 IL5RAQ01344 420 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 FAPQ12884 760 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 LINGO2Q7L985 606 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 CXXC5Q7LFL8 322 aaKnown RBP12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 BCDIN3DQ7Z5W3 292 aaKnown RBP12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 ENTHD1Q8IYW4 607 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 OR6V1Q8N148 313 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 SETD9Q8NE22 299 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 OR9Q1Q8NGQ5 310 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 RHOXF1Q8NHV9 184 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 NSMAFQ92636 917 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 ZNF837Q96EG3 531 aaPredicted RBP12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 HCAR1Q9BXC0 346 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 NMNAT2Q9BZQ4 307 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 PIGMQ9H3S5 423 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 RERGLQ9H628 205 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 CRLF2Q9HC73 371 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 ASB6Q9NWX5 421 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 COQ3Q9NZJ6 369 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 AASSQ9UDR5 926 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 MALT1Q9UDY8 824 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 SLC5A6Q9Y289 635 aa12.1□□□□□ -0.47
TUBA1B-202ENST00000336023 FREM1Q5H8C1 2179 aa12.09□□□□□ -0.47
TUBA1B-202ENST00000336023 EEF1E1-BLOC1S5C9J1V9 151 aa12.09□□□□□ -0.47
TUBA1B-202ENST00000336023 ZNF587BE7ETH6 402 aa12.09□□□□□ -0.47
TUBA1B-202ENST00000336023 MSTNO14793 375 aa12.09□□□□□ -0.47
TUBA1B-202ENST00000336023 EEF1E1O43324 174 aaKnown RBP12.09□□□□□ -0.47
TUBA1B-202ENST00000336023 MPZL2O60487 215 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms