RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 HIST1H1CP16403 213 aaKnown RBP22.14■■□□□ 1.14
SOX1-201ENST00000330949 CSRP1P21291 193 aaKnown RBP22.14■■□□□ 1.14
SOX1-201ENST00000330949 PSMB5P28074 263 aa22.14■■□□□ 1.14
SOX1-201ENST00000330949 OR5AK2Q8NH90 309 aa22.14■■□□□ 1.14
SOX1-201ENST00000330949 NUDCD2Q8WVJ2 157 aa22.14■■□□□ 1.14
SOX1-201ENST00000330949 MRPL38Q96DV4 380 aaKnown RBP22.14■■□□□ 1.14
SOX1-201ENST00000330949 MYADMQ96S97 322 aa22.14■■□□□ 1.14
SOX1-201ENST00000330949 SEMA6CQ9H3T2 930 aa22.14■■□□□ 1.14
SOX1-201ENST00000330949 WSB2Q9NYS7 404 aaPredicted RBP22.14■■□□□ 1.14
SOX1-201ENST00000330949 PCDHGA1Q9Y5H4 931 aa22.14■■□□□ 1.14
SOX1-201ENST00000330949 RHPN2P1A8MT19 583 aa22.14■■□□□ 1.13
SOX1-201ENST00000330949 MAS1P04201 325 aa22.14■■□□□ 1.13
SOX1-201ENST00000330949 FAM157CP0CG43 387 aa22.14■■□□□ 1.13
SOX1-201ENST00000330949 NR0B2Q15466 257 aa22.14■■□□□ 1.13
SOX1-201ENST00000330949 ZNF124Q15973 351 aa22.14■■□□□ 1.13
SOX1-201ENST00000330949 MST1LQ2TV78 715 aa22.14■■□□□ 1.13
SOX1-201ENST00000330949 TMEM244Q5VVB8 128 aa22.14■■□□□ 1.13
SOX1-201ENST00000330949 CREBZFQ9NS37 354 aa22.14■■□□□ 1.13
SOX1-201ENST00000330949 USP36Q9P275 1121 aaKnown RBP22.14■■□□□ 1.13
SOX1-201ENST00000330949 TBC1D3KA0A087X1G2 549 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 TBC1D3BA6NDS4 549 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 TBC1D3FA6NER0 549 aaPredicted RBP22.13■■□□□ 1.13
SOX1-201ENST00000330949 NPIPB9F8W1W9 429 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 RNASEK-C17orf49H0YIS7 233 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 K7ESM1 405 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 FNDC3BQ53EP0 1204 aaKnown RBP22.13■■□□□ 1.13
SOX1-201ENST00000330949 C9orf152Q5JTZ5 239 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 TBC1D3GQ6DHY5 549 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 FOXRED1Q96CU9 486 aaPredicted RBP22.13■■□□□ 1.13
SOX1-201ENST00000330949 VWCEQ96DN2 955 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 XKR8Q9H6D3 395 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 ZDHHC4Q9NPG8 344 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 ASH2LQ9UBL3 628 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 CENPVL1A0A0U1RR11 272 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 CDC40O60508 579 aaKnown RBP eCLIP22.13■■□□□ 1.13
SOX1-201ENST00000330949 HIST1H1TP22492 207 aaPredicted RBP22.13■■□□□ 1.13
SOX1-201ENST00000330949 EFNB2P52799 333 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 ARHGAP11BQ3KRB8 267 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 LY6G5CQ5SRR4 150 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 MFSD12Q6NUT3 480 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 NRSN1Q8IZ57 195 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 SAT2Q96F10 170 aaPredicted RBP22.13■■□□□ 1.13
SOX1-201ENST00000330949 ZNF514Q96K75 400 aaPredicted RBP22.13■■□□□ 1.13
SOX1-201ENST00000330949 LINC00615Q96LM1 132 aaPredicted RBP22.13■■□□□ 1.13
SOX1-201ENST00000330949 HRH4Q9H3N8 390 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 OPA3Q9H6K4 179 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 CHRNA9Q9UGM1 479 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 CES1P1Q9UKY3 287 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 WNT6Q9Y6F9 365 aa22.13■■□□□ 1.13
SOX1-201ENST00000330949 PSMD9O00233 223 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 KLK3P07288 261 aaPredicted RBP22.12■■□□□ 1.13
SOX1-201ENST00000330949 BTF3P20290 206 aaKnown RBP22.12■■□□□ 1.13
SOX1-201ENST00000330949 HSD17B2P37059 387 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 ELAVL1Q15717 326 aaKnown RBP22.12■■□□□ 1.13
SOX1-201ENST00000330949 OR51D1Q8NGF3 324 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 OR2L2Q8NH16 312 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 ZNF417Q8TAU3 575 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 SELENOIQ9C0D9 397 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 AICDAQ9GZX7 198 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 LAT2Q9GZY6 243 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 OR52A5Q9H2C5 316 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 CPED1A4D0V7 1026 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 P2RX6O15547 441 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 TACSTD2P09758 323 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 NQO2P16083 231 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 FAM76BQ5HYJ3 339 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 MRPL2Q5T653 305 aaKnown RBP22.12■■□□□ 1.13
SOX1-201ENST00000330949 OR52W1Q6IF63 320 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 SLC29A4Q7RTT9 530 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 GGACTQ9BVM4 153 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 SDHAF3Q9NRP4 125 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 ZNF780BQ9Y6R6 833 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 TRBV5-5A0A0J9YX44 114 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 POM121BA6NF01 834 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 AP4M1O00189 453 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 AK4P27144 223 aaPredicted RBP22.12■■□□□ 1.13
SOX1-201ENST00000330949 FAM220AQ7Z4H9 259 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 CACUL1Q86Y37 369 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 ACOT4Q8N9L9 421 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 GTF3AQ92664 365 aaKnown RBP22.12■■□□□ 1.13
SOX1-201ENST00000330949 FGF13Q92913 245 aa22.12■■□□□ 1.13
SOX1-201ENST00000330949 REV3LO60673 3130 aa22.11■■□□□ 1.13
SOX1-201ENST00000330949 NARSO43776 548 aaKnown RBP22.11■■□□□ 1.13
SOX1-201ENST00000330949 CD2P06729 351 aa22.11■■□□□ 1.13
SOX1-201ENST00000330949 KLHL26Q53HC5 615 aa22.11■■□□□ 1.13
SOX1-201ENST00000330949 SLC35D3Q5M8T2 416 aa22.11■■□□□ 1.13
SOX1-201ENST00000330949 LYG2Q86SG7 212 aa22.11■■□□□ 1.13
SOX1-201ENST00000330949 ZNF547Q8IVP9 402 aa22.11■■□□□ 1.13
SOX1-201ENST00000330949 PAQR4Q8N4S7 273 aaPredicted RBP22.11■■□□□ 1.13
SOX1-201ENST00000330949 OR6K6Q8NGW6 343 aa22.11■■□□□ 1.13
SOX1-201ENST00000330949 M0QYG6 137 aa22.11■■□□□ 1.13
SOX1-201ENST00000330949 MFNGO00587 321 aa22.11■■□□□ 1.13
SOX1-201ENST00000330949 ERI3O43414 337 aaKnown RBP22.11■■□□□ 1.13
SOX1-201ENST00000330949 DBIP07108 87 aaKnown RBP22.11■■□□□ 1.13
SOX1-201ENST00000330949 AVPR2P30518 371 aa22.11■■□□□ 1.13
SOX1-201ENST00000330949 POU3F4P49335 361 aa22.11■■□□□ 1.13
SOX1-201ENST00000330949 CSNK1G2P78368 415 aa22.11■■□□□ 1.13
SOX1-201ENST00000330949 AKIRIN2Q53H80 203 aa22.11■■□□□ 1.13
SOX1-201ENST00000330949 CCDC74AQ96AQ1 378 aa22.11■■□□□ 1.13
SOX1-201ENST00000330949 RBM18Q96H35 190 aaKnown RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms