RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 ZNF837Q96EG3 531 aaPredicted RBP16.07■□□□□ 0.16
HMGA1-201ENST00000311487 FOXN4Q96NZ1 517 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 ALKBH3Q96Q83 286 aaPredicted RBP16.07■□□□□ 0.16
HMGA1-201ENST00000311487 OR2M2Q96R28 347 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 NMNAT3Q96T66 252 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 PAK1IP1Q9NWT1 392 aaPredicted RBP16.07■□□□□ 0.16
HMGA1-201ENST00000311487 AASSQ9UDR5 926 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 UBR5O95071 2799 aaPredicted RBP16.07■□□□□ 0.16
HMGA1-201ENST00000311487 A0A1B0GUH1 482 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 FAM90A27PA6NNH2 459 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 ZNF724A8MTY0 619 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 GIPRP48546 466 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 FMODQ06828 376 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 MAD2L1BPQ15013 274 aaPredicted RBP16.07■□□□□ 0.16
HMGA1-201ENST00000311487 POU4F3Q15319 338 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 TSC22D1Q15714 1073 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 ARMC4Q5T2S8 1044 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 TSPO2Q5TGU0 170 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 XAF1Q6GPH4 301 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 TMEM211Q6ICI0 200 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 PTCHD4Q6ZW05 846 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 SPARTQ8N0X7 666 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 SDR9C7Q8NEX9 313 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 OR2T33Q8NG76 320 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 OR52E2Q8NGJ4 325 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 UBE2FQ969M7 185 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 HRASLS5Q96KN8 279 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 TSSK2Q96PF2 358 aa16.07■□□□□ 0.16
HMGA1-201ENST00000311487 USP9XQ93008 2570 aaPredicted RBP16.07■□□□□ 0.16
HMGA1-201ENST00000311487 TENM4Q6N022 2769 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 LOC102725191A0A1B0GVB3 256 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 NKX2-6A6NCS4 301 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 GPR171O14626 319 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 XPNPEP2O43895 674 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 FMO3P31513 532 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 CDKN2AP42771 156 aaKnown RBP16.06■□□□□ 0.16
HMGA1-201ENST00000311487 PIGFQ07326 219 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 LSAMPQ13449 338 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 RIPPLY2Q5TAB7 128 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 LINGO2Q7L985 606 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 CLVS1Q8IUQ0 354 aaPredicted RBP16.06■□□□□ 0.16
HMGA1-201ENST00000311487 APH1AQ96BI3 265 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 FANCFQ9NPI8 374 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 SLC7A10Q9NS82 523 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 TVP23BQ9NYZ1 205 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 UTP20O75691 2785 aaKnown RBP16.06■□□□□ 0.16
HMGA1-201ENST00000311487 FAM183AA6NL82 134 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 HSPB2A8KAH6 182 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 FAM171A2A8MVW0 826 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 TRMUO75648 421 aaKnown RBP16.06■□□□□ 0.16
HMGA1-201ENST00000311487 SEC14L2O76054 403 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 ZNF432O94892 652 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 TTKP33981 857 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 DAP3P51398 398 aaKnown RBP16.06■□□□□ 0.16
HMGA1-201ENST00000311487 FAPQ12884 760 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 SNTB1Q13884 538 aaKnown RBP16.06■□□□□ 0.16
HMGA1-201ENST00000311487 HSPB2Q16082 182 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 SLC27A4Q6P1M0 643 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 BCDIN3DQ7Z5W3 292 aaKnown RBP16.06■□□□□ 0.16
HMGA1-201ENST00000311487 ALDH16A1Q8IZ83 802 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 PARP8Q8N3A8 854 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 RELL2Q8NC24 303 aaPredicted RBP16.06■□□□□ 0.16
HMGA1-201ENST00000311487 MED20Q9H944 212 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 SLC24A3Q9HC58 644 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 GLRX2Q9NS18 164 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 PROCRQ9UNN8 238 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 SLC5A6Q9Y289 635 aa16.06■□□□□ 0.16
HMGA1-201ENST00000311487 SPTBN1Q01082 2364 aaKnown RBP16.05■□□□□ 0.16
HMGA1-201ENST00000311487 IGKV1D-43A0A0B4J1Z2 117 aa16.05■□□□□ 0.16
HMGA1-201ENST00000311487 KRT33AO76009 404 aa16.05■□□□□ 0.16
HMGA1-201ENST00000311487 CGAP01215 116 aa16.05■□□□□ 0.16
HMGA1-201ENST00000311487 PCSK6P29122 969 aa16.05■□□□□ 0.16
HMGA1-201ENST00000311487 SDHAP31040 664 aa16.05■□□□□ 0.16
HMGA1-201ENST00000311487 CLRN1P58418 232 aa16.05■□□□□ 0.16
HMGA1-201ENST00000311487 CXCR4P61073 352 aa16.05■□□□□ 0.16
HMGA1-201ENST00000311487 KRR1Q13601 381 aaKnown RBP16.05■□□□□ 0.16
HMGA1-201ENST00000311487 PGGHGQ32M88 737 aa16.05■□□□□ 0.16
HMGA1-201ENST00000311487 ANKDD1AQ495B1 522 aa16.05■□□□□ 0.16
HMGA1-201ENST00000311487 LEG1Q6P5S2 330 aa16.05■□□□□ 0.16
HMGA1-201ENST00000311487 TMEM123Q8N131 208 aa16.05■□□□□ 0.16
HMGA1-201ENST00000311487 ARIH2OSQ8N7S6 290 aa16.05■□□□□ 0.16
HMGA1-201ENST00000311487 OR6N1Q8NGY5 312 aa16.05■□□□□ 0.16
HMGA1-201ENST00000311487 ZNF519Q8TB69 540 aa16.05■□□□□ 0.16
HMGA1-201ENST00000311487 NSMAFQ92636 917 aa16.05■□□□□ 0.16
HMGA1-201ENST00000311487 GPX7Q96SL4 187 aaPredicted RBP16.05■□□□□ 0.16
HMGA1-201ENST00000311487 VCX3AQ9NNX9 186 aa16.05■□□□□ 0.16
HMGA1-201ENST00000311487 GYPBP06028 91 aa16.04■□□□□ 0.16
HMGA1-201ENST00000311487 GGT2P36268 569 aa16.04■□□□□ 0.16
HMGA1-201ENST00000311487 CDK5Q00535 292 aa16.04■□□□□ 0.16
HMGA1-201ENST00000311487 ETFDHQ16134 617 aa16.04■□□□□ 0.16
HMGA1-201ENST00000311487 TFAP2EQ6VUC0 442 aa16.04■□□□□ 0.16
HMGA1-201ENST00000311487 MRGPRGQ86SM5 289 aa16.04■□□□□ 0.16
HMGA1-201ENST00000311487 ENTHD1Q8IYW4 607 aa16.04■□□□□ 0.16
HMGA1-201ENST00000311487 OR13F1Q8NGS4 319 aa16.04■□□□□ 0.16
HMGA1-201ENST00000311487 OR6X1Q8NH79 312 aa16.04■□□□□ 0.16
HMGA1-201ENST00000311487 APH1BQ8WW43 257 aa16.04■□□□□ 0.16
HMGA1-201ENST00000311487 ISOC1Q96CN7 298 aa16.04■□□□□ 0.16
HMGA1-201ENST00000311487 SLC25A44Q96H78 314 aaPredicted RBP16.04■□□□□ 0.16
HMGA1-201ENST00000311487 SYT4Q9H2B2 425 aa16.04■□□□□ 0.16
HMGA1-201ENST00000311487 PTGES3LE9PB15 166 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms