RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 OR52N1Q8NH53 320 aa20.08■□□□□ 0.81
IRF3-201ENST00000309877 ZNF420Q8TAQ5 688 aaPredicted RBP20.08■□□□□ 0.81
IRF3-201ENST00000309877 GATAD2BQ8WXI9 593 aa20.08■□□□□ 0.81
IRF3-201ENST00000309877 ISOC1Q96CN7 298 aa20.08■□□□□ 0.81
IRF3-201ENST00000309877 YIPF6Q96EC8 236 aa20.08■□□□□ 0.81
IRF3-201ENST00000309877 ZNF845Q96IR2 970 aaPredicted RBP20.08■□□□□ 0.81
IRF3-201ENST00000309877 ZNF649Q9BS31 505 aa20.08■□□□□ 0.81
IRF3-201ENST00000309877 ALG8Q9BVK2 526 aa20.08■□□□□ 0.81
IRF3-201ENST00000309877 MRPL13Q9BYD1 178 aaKnown RBP20.08■□□□□ 0.81
IRF3-201ENST00000309877 PAQR5Q9NXK6 330 aaPredicted RBP20.08■□□□□ 0.81
IRF3-201ENST00000309877 CAB39Q9Y376 341 aaPredicted RBP20.08■□□□□ 0.81
IRF3-201ENST00000309877 IGLV1-36A0A0B4J1U3 117 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 A0A1W2PQL4 384 aaPredicted RBP20.07■□□□□ 0.8
IRF3-201ENST00000309877 TVP23AA6NH52 213 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 TFP02787 698 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 PDGFAP04085 211 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 CD36P16671 472 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 LIPAP38571 399 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 HCCSP53701 268 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 TBR1Q16650 682 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 SLC16A9Q7RTY1 509 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 NOXO1Q8NFA2 376 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 NAA50Q9GZZ1 169 aaKnown RBP20.07■□□□□ 0.8
IRF3-201ENST00000309877 KHDRBS3O75525 346 aaKnown RBP20.07■□□□□ 0.8
IRF3-201ENST00000309877 SYNGR4O95473 234 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 PGA4P0DJD7 388 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 PGA3P0DJD8 388 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 TMBIM6P55061 237 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 GLO1Q04760 184 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 FMODQ06828 376 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 ETFDHQ16134 617 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 TSTQ16762 297 aaKnown RBP20.07■□□□□ 0.8
IRF3-201ENST00000309877 THEM4Q5T1C6 240 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 Q6ZS92 163 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 FCRLAQ7L513 359 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 CHMP1BQ7LBR1 199 aa20.07■□□□□ 0.8
IRF3-201ENST00000309877 COA3Q9Y2R0 106 aaPredicted RBP20.07■□□□□ 0.8
IRF3-201ENST00000309877 AKAP8O43823 692 aaKnown RBP20.06■□□□□ 0.8
IRF3-201ENST00000309877 SCG5P05408 212 aa20.06■□□□□ 0.8
IRF3-201ENST00000309877 ZNF85Q03923 595 aa20.06■□□□□ 0.8
IRF3-201ENST00000309877 MLLT11Q13015 90 aaPredicted RBP20.06■□□□□ 0.8
IRF3-201ENST00000309877 ZNF322Q6U7Q0 402 aaPredicted RBP20.06■□□□□ 0.8
IRF3-201ENST00000309877 P2RY8Q86VZ1 359 aa20.06■□□□□ 0.8
IRF3-201ENST00000309877 ANKRD13BQ86YJ7 626 aa20.06■□□□□ 0.8
IRF3-201ENST00000309877 TIGD4Q8IY51 512 aa20.06■□□□□ 0.8
IRF3-201ENST00000309877 FNDC8Q8TC99 324 aa20.06■□□□□ 0.8
IRF3-201ENST00000309877 SPRYD4Q8WW59 207 aaPredicted RBP20.06■□□□□ 0.8
IRF3-201ENST00000309877 MRPL48Q96GC5 212 aaKnown RBP20.06■□□□□ 0.8
IRF3-201ENST00000309877 FOXN4Q96NZ1 517 aa20.06■□□□□ 0.8
IRF3-201ENST00000309877 OPALINQ96PE5 141 aa20.06■□□□□ 0.8
IRF3-201ENST00000309877 ZNF385AQ96PM9 386 aaKnown RBP20.06■□□□□ 0.8
IRF3-201ENST00000309877 INTS14Q96SY0 518 aa20.06■□□□□ 0.8
IRF3-201ENST00000309877 TIMP4Q99727 224 aa20.06■□□□□ 0.8
IRF3-201ENST00000309877 MCTS1Q9ULC4 181 aaKnown RBP20.06■□□□□ 0.8
IRF3-201ENST00000309877 CENPBD1B2RD01 187 aa20.05■□□□□ 0.8
IRF3-201ENST00000309877 ZNF670-ZNF695F2Z2N8 137 aa20.05■□□□□ 0.8
IRF3-201ENST00000309877 ZNF701M0R085 212 aaPredicted RBP20.05■□□□□ 0.8
IRF3-201ENST00000309877 GPANK1O95872 356 aa20.05■□□□□ 0.8
IRF3-201ENST00000309877 CD79BP40259 229 aa20.05■□□□□ 0.8
IRF3-201ENST00000309877 RGS6P49758 472 aa20.05■□□□□ 0.8
IRF3-201ENST00000309877 RASGEF1BQ0VAM2 473 aa20.05■□□□□ 0.8
IRF3-201ENST00000309877 DOC2BQ14184 412 aa20.05■□□□□ 0.8
IRF3-201ENST00000309877 CNPY1Q3B7I2 92 aa20.05■□□□□ 0.8
IRF3-201ENST00000309877 ABLIM2Q6H8Q1 611 aa20.05■□□□□ 0.8
IRF3-201ENST00000309877 RBMXL3Q8N7X1 1067 aaKnown RBP20.05■□□□□ 0.8
IRF3-201ENST00000309877 OR6N2Q8NGY6 317 aa20.05■□□□□ 0.8
IRF3-201ENST00000309877 RAB2BQ8WUD1 216 aa20.05■□□□□ 0.8
IRF3-201ENST00000309877 ABHD17AQ96GS6 310 aa20.05■□□□□ 0.8
IRF3-201ENST00000309877 MYCBPQ99417 103 aaPredicted RBP20.05■□□□□ 0.8
IRF3-201ENST00000309877 ARHGAP9Q9BRR9 750 aa20.05■□□□□ 0.8
IRF3-201ENST00000309877 SPRR3Q9UBC9 169 aa20.05■□□□□ 0.8
IRF3-201ENST00000309877 K7EM74 188 aa20.04■□□□□ 0.8
IRF3-201ENST00000309877 CYTIPO60759 359 aa20.04■□□□□ 0.8
IRF3-201ENST00000309877 IGHG3P01860 377 aa20.04■□□□□ 0.8
IRF3-201ENST00000309877 NR2C1P13056 603 aa20.04■□□□□ 0.8
IRF3-201ENST00000309877 TGFBR2P37173 567 aa20.04■□□□□ 0.8
IRF3-201ENST00000309877 ZIC4Q8N9L1 334 aa20.04■□□□□ 0.8
IRF3-201ENST00000309877 NSMAFQ92636 917 aa20.04■□□□□ 0.8
IRF3-201ENST00000309877 EXTL1Q92935 676 aa20.04■□□□□ 0.8
IRF3-201ENST00000309877 NMD3Q96D46 503 aaKnown RBP20.04■□□□□ 0.8
IRF3-201ENST00000309877 PRRG4Q9BZD6 226 aa20.04■□□□□ 0.8
IRF3-201ENST00000309877 YIPF3Q9GZM5 350 aa20.04■□□□□ 0.8
IRF3-201ENST00000309877 WDR76Q9H967 626 aa20.04■□□□□ 0.8
IRF3-201ENST00000309877 MARCH7Q9H992 704 aa20.04■□□□□ 0.8
IRF3-201ENST00000309877 ISYNA1Q9NPH2 558 aa20.04■□□□□ 0.8
IRF3-201ENST00000309877 ENPP5Q9UJA9 477 aa20.04■□□□□ 0.8
IRF3-201ENST00000309877 APC2O95996 2303 aa20.04■□□□□ 0.8
IRF3-201ENST00000309877 ZFHX4Q86UP3 3567 aa20.03■□□□□ 0.8
IRF3-201ENST00000309877 ZNF716A6NP11 495 aa20.03■□□□□ 0.8
IRF3-201ENST00000309877 CCRL2O00421 344 aa20.03■□□□□ 0.8
IRF3-201ENST00000309877 MT-ND5P03915 603 aa20.03■□□□□ 0.8
IRF3-201ENST00000309877 CPN1P15169 458 aa20.03■□□□□ 0.8
IRF3-201ENST00000309877 HSF2Q03933 536 aa20.03■□□□□ 0.8
IRF3-201ENST00000309877 C3AR1Q16581 482 aa20.03■□□□□ 0.8
IRF3-201ENST00000309877 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.03■□□□□ 0.8
IRF3-201ENST00000309877 ZNF485Q8NCK3 441 aa20.03■□□□□ 0.8
IRF3-201ENST00000309877 OR6N1Q8NGY5 312 aa20.03■□□□□ 0.8
IRF3-201ENST00000309877 SNX33Q8WV41 574 aa20.03■□□□□ 0.8
IRF3-201ENST00000309877 PNPLA2Q96AD5 504 aa20.03■□□□□ 0.8
IRF3-201ENST00000309877 ZNF775Q96BV0 537 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms